Serratia plymuthica 4Rx13: SOD_c34890
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Entry
SOD_c34890 CDS
T02710
Symbol
ydfH
Name
(GenBank) putative HTH-type transcriptional regulator YdfH
KO
K22293
GntR family transcriptional regulator, rspAB operon transcriptional repressor
Organism
srl
Serratia plymuthica 4Rx13
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srl03000
]
SOD_c34890 (ydfH)
Transcription factors [BR:
srl03000
]
Prokaryotic type
Helix-turn-helix
GntR family
SOD_c34890 (ydfH)
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Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
T5orf172
Imm49
MUG113
Rrf2
TrmB
Fe_dep_repress
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
AGO56447
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Position
3929505..3930191
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AA seq
228 aa
AA seq
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MSESYSLTNTLPVNQQIYRFLRKDIVDCTIPPGTLLSEKEISTRFSVSRQPVREAFIKLA
EAGLVQILPQRGTFVMKISAKRVADGRFIRQAVECAIVRRVAQRITPEQLMTLEHNLHRQ
ELAAQNQQTREFLALDDEFHQLLTQFADCPLAWETIETIKATMDRVRFLSLSEVSPPESL
IQQHYRIFTALKAQDADAAERAIHEHLQEMIYSITPIALQNTEWFDIE
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaatcctacagcctcaccaacacccttccggtcaaccagcaaatttaccgtttc
ctgcgtaaagacattgtcgactgcaccattccgcccggcacgctgctttccgagaaagag
atttccacccgttttagcgtttcgcgccaaccggtgcgcgaggctttcatcaagctggcg
gaggccgggttggtgcagatactgccgcagcgcggcactttcgtgatgaagatttccgcc
aagcgagtggccgacgggcgctttatccgccaggcggtggaatgcgcgatcgtccgccgc
gtggcgcagcggatcacgccggaacagctgatgacgctggagcacaatttgcatcgccag
gaactggcggcgcaaaaccaacagacgcgcgagtttttggcgctggacgatgagttccac
cagttgctgacccagttcgccgactgcccgctggcctgggaaaccatcgaaaccatcaaa
gccaccatggatcgggtgcgttttctcagcctgagcgaggtgtcgccgccggaaagcctg
atccagcaacattatcggatctttaccgcgctgaaggctcaagatgcggacgccgccgaa
cgcgccattcatgagcacctgcaggagatgatctactctattacgccgatcgccctgcaa
aacaccgagtggttcgatatcgagtaa
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