Serratia plymuthica 4Rx13: SOD_c35020
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Entry
SOD_c35020 CDS
T02710
Symbol
csd
Name
(GenBank) putative cysteine desulfurase Csd
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl00450
Selenocompound metabolism
srl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
SOD_c35020 (csd)
Enzymes [BR:
srl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
SOD_c35020 (csd)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
SOD_c35020 (csd)
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
DUF3344
Motif
Other DBs
NCBI-ProteinID:
AGO56460
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All DBs
Position
complement(3940772..3941989)
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AA seq
405 aa
AA seq
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MSHSPVCKSDFPALQQEIDGNSIIYLDNAATTLKPRAVIKAVSDFYTFNGANIHRGKHRL
SDEASNDYEHARLDISNYIGAQANELVFTGNTTHSLNIVAHGLQLSKQDIVLVNEDAHHS
NILPWRQTADVRFIRTTAEGRLDLDHFRELLSLKPSVVALTHCSNVTGAVHPIGLMVKLI
RASSDAVIVLDAAQSLPHERIDFHQLDVDFAAFSAHKMYGPTGVGLLYGKYALLEKLKPL
QYGGGTVDWVDAKKQINRRAPYHLEAGTPAIASVLGTGAAVRYLLQCDESLRSAHDRALS
EAMLKSIAERPFLSLLGPHDTKDRHAIFSVKFDSSIPAGELTRLLSDSWGIMCRSGYLCA
QPFVTEKAQGEVIRISACIYNELSEIETLFSAIDELATCVGLATI
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
gtgagccattccccggtctgtaaatctgatttcccagccctacagcaagagattgacggc
aatagcattatttatctcgataatgccgccactacgctaaagcctcgcgcggttattaag
gcggtcagtgatttttatacctttaatggagccaatatacatcgcggtaagcatcgactt
tccgatgaagcatcgaatgattatgaacatgcaaggttggatatttctaactatattggc
gcgcaagccaatgaattggtctttaccggaaatactacgcattctctgaatatcgttgcg
catgggctgcagctcagcaagcaggacattgtcctggtcaatgaggatgctcaccattca
aatattcttccctggcggcaaacagctgacgtgcgctttattcgcactactgcggaaggg
cgtctcgatctggaccattttcgcgagttactgtcgctaaaaccaagcgttgtggcatta
actcactgttcaaatgtcacgggggcggtgcatccgatcgggctgatggtgaaattaatc
agggcgtcctctgacgctgttatcgtcctggacgctgctcagtcactgccgcatgagcgc
attgattttcaccagcttgatgtcgactttgcggcattttccgcccataaaatgtatggt
ccaacaggagtgggtcttctgtatggaaaatatgccttactggaaaaattgaaaccgctg
caatacggcggtggaactgtggattgggttgatgcgaaaaagcagataaatagacgtgcg
ccataccaccttgaagccggcacacccgctatcgcttctgtattaggcactggggccgct
gtgcgttacttgctgcagtgtgatgaaagcctgagaagtgctcatgacagggcattgtca
gaggcgatgttgaaatctattgcagaacgcccattcctgtcgttacttggaccgcacgat
acaaaggaccggcatgcgatattttccgtgaagtttgacagcagtattccggcgggggag
ttgactcgtttgctgagtgattcatggggcatcatgtgtcgcagtggctatctttgcgca
cagccctttgtaactgaaaaagcacagggtgaagttattcgtatttctgcctgtatttat
aatgaactgtcagaaatcgaaacgcttttttctgctattgatgagctggcgacctgcgtg
ggtttggctacaatttaa
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