Serratia plymuthica 4Rx13: SOD_c35070
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Entry
SOD_c35070 CDS
T02710
Symbol
lgrB
Name
(GenBank) linear gramicidin synthase subunit B
Organism
srl
Serratia plymuthica 4Rx13
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Condensation
AMP-binding_C
PP-binding
Motif
Other DBs
NCBI-ProteinID:
AGO56465
LinkDB
All DBs
Position
complement(3948288..3953021)
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AA seq
1577 aa
AA seq
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MNNPPSVVGHFCPSDYGYSLHNAFFRQAIRTPAAIALRDDAGVMTYAELREQACAIASSL
SSHGLMPETAVGVYLPRDRNLPAALIGIMAAGCAYLPLDPRYPQQRIEQLITIGQVQCVI
TTRLLAETLPGDVTAICIEDIALVDLDHVLNNDPAQSNSLAYFIFTSGSTGVPKGVMIEH
GNALSLLYWAHHFYSSSQLASVAFTTSITFDLSVFEIFVPLSAGGMIHILENGLSLLDWK
WRDVLTLLNTVPSVLNEVAKLGHLPQQLSVINLAGEPLPASLVLILRAQCPNAQIFNLYG
PSEDTTYSTVSEVLASDDQPTIGLAMLGRHCYLLNESGNEVAHGEVGEIYVAGPGVARGY
YGRPDLESVFMPDKRQPDSYRMYRTGDFGRQLADGRILCLGRRDDQVKIRGHRVEIGEVD
ATMRKHPAVAEVAVVVVDSPARGKFLRCALELHDSTNQADIAAWASARLPAFMIPSEWQI
FDKLPRLPNGKIDRAYLRKAATVRAHLTDDQHPMGQTEETLAQCWRRLLEQPTIGRHDSF
FALGGHSLLFTRLQYHIREIFSVSIKLAALMSASTLAEQAKLIAQSDVIDDRAGSSEELS
CTPSQRRMWTLEKLLPGSPRYNIANTFQLQGELDNQRLIAALTATAAHHAMLHTVYGESD
RGLQPVPLAEHRVNVLQKNLSQMPLVQALEQAKTLSSAFQRQPFELSSNVPFGVQIITVA
PTLHLVDIKTHHIAADGSMELLVEEISFRYNRPHAPIQSCRTYNDYAQYLLTPSLQMEQE
KSLQWWQMALANPPELLRLPFDKPAKRSTTGVGQLLSITVDQETVRSLLKLCQQHQGSLF
HGLLAVTWAFLGKLSESDDVLLALPVHTRPSEYARTVGNFVNTAIARGRPHAAMTFEQLL
QAAKENTLQLLRHADVPFESVLNAVKGLRSAEGVPSVNVMLSLLVSPALLELEGCQTTFL
PVDLGTSRFDLGLFFRYDNTGLVLNLEYDTQRFSDAMARSLSQTWTGFCANLTANSRAPL
SQVGLLSEASHQKIVEDWNNTKTAVAFEGRIDMLFSQRVVGQPDHTALIAGQDVLSYQQL
DRSANQLAWSLRDAGVPVGAHVGILCERGAAMVIAVLAVLKAGCVYVPIDPSTPAERCRL
MATVANFSGLISDDALRNKALSIQAEVPLTLIWADSDAHRMQCDTPPDNPATADDRAYII
FTSGTTGIPKAVAVKHRPAVNLIDWVNRRFAVSPVDKLLFVTSIAFDLSVYDMLGTLAAG
ATLRVASREEIRNPELLSQIVSREAITFWNSAPVILDQLIPYLDVTGNPHLRLAFLSGDW
IPVSLPTRLAEKCPKAELIALGGATEAVIWSNFFPTSGNQRELSSIPYGKPIQNARYYIL
DPHQLPVPVGVEGDLYIGGDVLAEGYYGDAHRTAEKFCRDPFVAAPSARMYFTGDRARFF
DDGNIEFLGRQDSQVKINGYRIEIDEIEAAILRCEGIVATHVSRKGERHHYWLCAYIVGQ
AMTQPDIALIKGTLSQSLPEYMIPALFITIDEMPVTVNGKLDKSKLPEPKLNVKDTEMSS
ENGMCIEEKVKTSGELF
NT seq
4734 nt
NT seq
+upstream
nt +downstream
nt
atgaataaccctccaagcgttgtcgggcatttctgtccgtcggattatggatacagctta
cacaacgcattttttcgccaggcaatacgcacgccagcggcaattgctcttcgcgatgat
gccggtgtgatgacctacgctgagttacgggagcaagcctgcgctattgcctcctctttg
agcagtcatggacttatgccggaaacggcggtcggggtgtatttaccccgcgatcgcaat
ttacccgctgcattgatcggcattatggccgccggctgcgcctatttgccgcttgaccca
cgttacccgcagcagcgcattgagcagttaatcacgatagggcaggttcagtgtgtcatt
accacgcgattgctggcggagacattgcctggtgatgtcacggccatttgcattgaagat
attgcgctggtcgatctggaccatgttctgaataacgaccctgcgcagtcaaactcactg
gcttactttatttttacttcgggttcaacgggggtgccaaagggagtgatgattgagcat
ggcaatgcactgtcacttctttactgggcgcatcatttttattcgtcatcgcagctggca
agtgtcgcatttactacttcgatcacctttgatctctcggtgtttgaaatctttgtgccg
ctgagcgcggggggaatgatccacatcctggaaaatggcttatcgctgcttgactggaag
tggcgcgacgtgctgacgctgctgaatacagtgccttctgtgctcaatgaagtggcgaag
ctggggcatttaccacagcagctttcggtgattaacctagccggtgaaccgctgcctgca
agcttagtgctgatattgcgcgcgcagtgccccaatgcgcagattttcaacttatatgga
ccttcggaagatacgacctattccaccgtaagcgaggttttggcgagcgatgaccagcct
accattggccttgcgatgctgggacgccactgctatttgctgaatgaaagtggtaatgag
gtcgcgcacggagaggttggagagatctacgtggccgggccgggtgttgcacgcggatat
tacggacgccccgaccttgagagcgtatttatgccggataaacggcaaccagacagctat
cgcatgtaccgtaccggtgattttggtcgccagcttgccgacgggcggatcttgtgtctg
gggcgacgtgacgatcaggtgaaaattcgtggtcatcgcgttgaaatcggtgaagtggac
gcaacaatgcgaaagcatcccgcggtggcagaggttgcggtggtggtggtcgattcaccc
gcacgcggaaagtttctgcgctgtgcgctcgaactgcacgacagcacaaaccaagccgat
atcgccgcgtgggcgagcgcacgcttgccggcgtttatgatcccctcagagtggcagatc
tttgacaagcttccgcgactgccaaacggcaaaattgatcgggcttacctgcgtaaagct
gcaactgtcagggcacacttaaccgacgatcagcatcctatggggcagactgaagaaacc
ctggcacagtgctggcgtcgtttgttagagcagccgacgattggccggcatgacagcttt
tttgctctgggtgggcattccctgttgttcacccgtttgcagtatcacatccgtgaaatc
ttctcggtcagcattaagctggcagcgttgatgtcagcgtccacattggctgaacaagcc
aaattgatagctcaatccgacgtgatagacgatcgcgccggaagcagcgaagagctgtcc
tgcacaccttctcagcgcagaatgtggaccttggaaaagctgctgccgggatcaccgcgt
tacaatattgcaaacaccttccaactgcagggcgagctggataaccaacggctgattgcg
gcgctgaccgcaacggcggcacaccatgccatgctgcacacggtatatggtgagtccgac
cgtggcctgcaacctgtgccactggccgaacaccgcgtgaacgtgttgcagaaaaatttg
agccagatgccgctggttcaggcactggagcaggccaaaactctatccagcgctttccag
cgacagccgtttgaactgagtagcaatgtacccttcggtgtgcaaattatcactgttgct
cccaccttgcacttggtggatatcaaaacccatcacattgcggccgatggatcgatggag
ctgctagtggaggagatctcgttccgctataaccgcccgcacgcccccatacagagctgc
cgaacgtataatgactacgcccaatatttgctgactccgtcgctgcaaatggagcaggaa
aagtcgctgcaatggtggcaaatggcgctcgcgaatccaccagagcttttacgcttacct
ttcgacaaaccggctaaacgaagcacgaccggtgttgggcaactgctaagcatcacggtg
gatcaggagacggtacgctctttgttgaagctgtgtcagcagcatcaggggtcgttgttc
cacggtctgctggccgttacctgggcatttctgggcaaactgtcagaaagtgacgatgtg
ttgctggctttgccagtacatacccgtccgtcggaatacgccagaacggtcggaaatttt
gttaatactgctattgcgcgcggacggccacatgccgctatgacctttgaacagttacta
caggccgcgaaagagaacacccttcagctgttgcggcatgcagatgtgccttttgagtca
gtattgaatgcggtgaaagggttacgttccgctgaaggcgtaccgtccgtgaatgtcatg
ctgtcactgttagtatctccggcacttctggagctggagggctgccagacaaccttcttg
cctgtagatcttggcaccagccgttttgacctcggcctgtttttccgttacgacaatacc
gggctggtgctaaacctggaatacgatacgcagcggtttagtgatgctatggcgaggagt
ttgtcgcagacctggaccggattttgcgcgaatctgacggcaaatagcagagcaccgctg
tctcaggtcggtctgttatctgaggcgtctcatcagaaaattgtggaggattggaacaac
acgaaaacggctgtggcgtttgaagggcgcatcgacatgcttttctcgcaacgcgttgtc
gggcaacccgaccacaccgctctgattgcgggtcaggatgtgctgagctatcagcagctc
gatcggagtgcgaaccagctggcctggagcctgcgtgatgctggtgtgccggtgggggct
catgtagggattttatgtgaacgcggtgcggcaatggttattgccgtactggcagtgctg
aaggcgggatgtgtctatgtgccgatcgacccgtcgacacctgcagaacgctgtcggctt
atggccaccgttgccaacttttctggcctgatcagtgatgacgctttgcgtaataaagcg
ctgagcattcaggctgaagtaccactgacgctgatctgggcggactctgatgcacatcgc
atgcagtgtgacacgccgccggacaatccagctacggcggatgatcgtgcctatattatt
tttacctccggtaccacgggaataccgaaagccgtcgcggtgaaacaccgaccggcggtc
aacctgattgactgggttaatcgcaggtttgcggtttctcccgtggataaacttctgttt
gtcacatcgatcgcattcgacctttccgtttatgacatgttgggcacgctggcagcgggt
gcgacgctgcgcgtagcgagccgggaagaaattcgtaaccctgaactactgagccagatt
gtcagccgggaagcgataaccttctggaattcggctccggtgatcctcgatcaacttatc
ccttatctggatgtaacaggtaacccgcatctccggctggcatttttatccggtgactgg
atcccggtgtcgctgccgacccggctggcggaaaaatgccctaaagcagagctgatcgcg
ctgggtggcgccaccgaagccgttatttggtccaactttttcccgacatccggcaatcaa
agagagctgagtagcattccttacggcaagccaattcagaatgcacgctactacattctg
gacccgcatcagttgccggtaccggtcggggttgagggcgacttatatattggtggtgat
gtgctggccgagggttactacggtgatgcacatcgcacagcggagaaattctgtcgcgat
ccttttgtcgccgccccttcagccagaatgtatttcactggagatcgggcgcggttcttt
gacgacggtaatattgagttccttgggcggcaggactcacaggtcaaaatcaatggctat
cgcatcgaaatcgatgaaatcgaagcggcgatcctgagatgtgaaggcattgtggcgacg
cacgtatcaagaaaaggtgaacgacaccattactggctttgtgcctacattgtcggtcag
gcaatgactcagccagatattgcgctgattaaaggaacgttaagtcagagtctgcctgaa
tatatgattcccgctttgtttattacgattgatgaaatgccggtaacggtaaatggaaaa
cttgataaaagtaaattgccggaacctaagttgaatgtaaaagatactgagatgtcgtcg
gaaaatggaatgtgtattgaggagaaagtaaaaacgtctggcgaattgttttaa
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