Serratia plymuthica 4Rx13: SOD_c35310
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Entry
SOD_c35310 CDS
T02710
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease 7 large subunit XseA
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SOD_c35310 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srl03400
]
SOD_c35310 (xseA)
Enzymes [BR:
srl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
SOD_c35310 (xseA)
DNA repair and recombination proteins [BR:
srl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
SOD_c35310 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Phasin
Motif
Other DBs
NCBI-ProteinID:
AGO56489
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All DBs
Position
3986682..3988067
Genome browser
AA seq
461 aa
AA seq
DB search
MSLPVSPSIFTVSRLNQTVRQLLEMEMGQIWLSAEISNFSQPASGHWYFTLKDDRAQVRC
AMFRNSNRRTTFRPQNGQQVLVRASITLYEPRGDYQLIAESMQPAGDGLLQQQFEQLKQR
LSAEGLFDQQFKQPLPSPAKRVGVITSASGAALHDVLQVLQRRDPSLPIVIYPTSVQGAE
APLQIVRAIETANRRDECDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVSAVGHET
DVTIADFVADLRAPTPSAAAELVSRNQLELLRQLQSQQQRMEMAMDYYLAQRQQQFTRIN
HRLQQQHPHLRLARQQTLLFKLQRRLEDGMQNQLRLSSRRSDRAQQRLAQVQPQARIHRY
QQRVQQQEYRLQQALERRLNAYRQRFGVACSQLEAVSPLATLARGYSVTQTPRGELLKTT
KQAQVGELLKTRLQDGWVESEVKTITVAKKPRKKRAADAAE
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctacctgtttcgccgtctatttttaccgtaagccgcctgaatcagacggttcga
cagctgctggaaatggaaatgggccagatttggctctccgccgagatctccaacttctcc
caaccggcttccggccactggtatttcacgctgaaagacgaccgcgcgcaggtgcgctgt
gcaatgttccgcaacagcaaccgccgcaccaccttccgcccgcaaaacggccagcaagtg
ttggttcgcgccagcatcacgctgtatgaaccgcgcggcgactatcagctgattgccgaa
agcatgcaacccgccggcgacggcctgctgcaacagcaattcgaacaactgaaacagcgc
ctgagcgccgaaggcctgttcgatcaacagttcaagcaaccgctgcccagcccggccaaa
cgcgtcggggtgatcacctccgccagcggcgcggcgctgcacgatgtgctgcaagtgctg
caacggcgcgatccttcgctgcccatcgttatctacccgacctcggtgcagggcgcggaa
gcgccattgcagatcgtgcgcgccatcgaaacggccaaccgccgcgacgaatgcgacgtg
ctgatcgtcggccgtggcggcggctcgctggaagacctgtggagttttaacgacgaacgc
gtagcgcgggcgatattcgccagccgcattccgatcgtcagcgccgtcggccatgaaacc
gacgtcaccattgccgactttgtcgccgatctgcgtgcgccaaccccttccgccgccgcc
gaactggtcagccgcaatcagctggagctgctgcgtcagttgcaatcccagcagcagcgg
atggaaatggcgatggattactatctggcccagcgtcagcagcagttcacccgcatcaac
caccgcttgcaacagcagcatccgcacctgcgcctggcgcgccagcagacgctgttgttc
aagctgcaacgccggttggaagacggcatgcaaaaccagctgcgcctgtcttcacgccgc
agcgatcgggcgcaacagcgtttggcgcaggtacagccgcaggcgcgcattcatcgctac
cagcaacgcgtgcagcaacaggaataccgtttgcagcaggcgctggagcgccgtctcaat
gcttaccgccagcgtttcggcgtggcctgcagccagctcgaagcggtcagcccgttggcg
acgctggcgcgcggctacagcgtgacgcaaaccccgcgcggcgaattgctgaaaaccacc
aaacaggcgcaggtcggcgaactgctgaaaacccgcctgcaggatggctgggtggaaagc
gaagtgaaaaccatcactgtggccaagaagccgcgcaaaaagcgcgcggctgacgcggcc
gaatag
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