Serratia plymuthica 4Rx13: SOD_c36410
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Entry
SOD_c36410 CDS
T02710
Symbol
rnc
Name
(GenBank) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SOD_c36410 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srl03019
]
SOD_c36410 (rnc)
03009 Ribosome biogenesis [BR:
srl03009
]
SOD_c36410 (rnc)
03036 Chromosome and associated proteins [BR:
srl03036
]
SOD_c36410 (rnc)
Enzymes [BR:
srl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
SOD_c36410 (rnc)
Messenger RNA biogenesis [BR:
srl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SOD_c36410 (rnc)
Ribosome biogenesis [BR:
srl03009
]
Eukaryotic type
90S particles
RNase
SOD_c36410 (rnc)
Prokaryotic type
rRNA processing factors
SOD_c36410 (rnc)
Chromosome and associated proteins [BR:
srl03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
SOD_c36410 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_2
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AGO56599
LinkDB
All DBs
Position
complement(4107990..4108670)
Genome browser
AA seq
226 aa
AA seq
DB search
MNPIVINRLQRKLGYTFQQQELLLQALTHRSASSKHNERLEFLGDSILSFVIANALYHRF
PRVDEGDMSRMRATLVRGNTLAEMAREFDLGECLRLGPGELKSGGFRRESILADTVEALI
GGVFLDSDIQNVERLILDWYRSRLDEISPGDKQKDPKTRLQEFLQGRHLPLPSYLVVQVR
GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccatcgtaataaacaggctgcagcggaagctgggctacacttttcaacagcag
gagctcttactgcaagcgttgactcaccgtagcgccagcagtaaacacaatgaacgtctt
gagtttctgggtgactctattcttagttttgtcatcgccaatgcgctctaccatcgtttt
cctcgcgtagacgagggcgatatgagccgcatgcgtgccacgctggtgcgcggcaatacg
ctggcagagatggcgcgcgagttcgacctgggtgaatgtctgcgcctcgggccgggtgag
ttgaaaagtggtggattccgccgcgaatcaatcctggcggatacggtggaggcattaatt
ggcggcgtgttcctggatagcgatatccaaaacgtcgaacgactgattttggactggtat
cgtagccggttggacgagatcagccccggtgataagcagaaagacccgaaaacccgcttg
caggagtttttacaaggtcgtcatctgccgttgccttcttatctggtggtgcaggttcgc
ggtgaggcgcacgatcaggagtttactatccactgccaggtgagtggtttgagcgaacct
gtagtgggtaccggctcaagccgccgtaaagccgaacaggcagcagcggaacaagcgttg
aaaaagctggagcttgaatga
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