Serratia plymuthica 4Rx13: SOD_c37420
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Entry
SOD_c37420 CDS
T02710
Symbol
lpxB
Name
(GenBank) lipid-A-disaccharide synthase LpxB
KO
K00748
lipid-A-disaccharide synthase [EC:
2.4.1.182
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl00540
Lipopolysaccharide biosynthesis
srl01100
Metabolic pathways
Module
srl_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
SOD_c37420 (lpxB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
srl01005
]
SOD_c37420 (lpxB)
Enzymes [BR:
srl01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.182 lipid-A-disaccharide synthase
SOD_c37420 (lpxB)
Lipopolysaccharide biosynthesis proteins [BR:
srl01005
]
Lipid A
SOD_c37420 (lpxB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LpxB
DeaD_dimer
Motif
Other DBs
NCBI-ProteinID:
AGO56695
LinkDB
All DBs
Position
complement(4212774..4213922)
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AA seq
382 aa
AA seq
DB search
MQNRPLTIGLVAGETSGDILGAGLIRALKAQIPDARFVGVAGPLMQAEGCETWYEMEELA
VMGVVEVLERLPRLLKIRKDLTRRFSELKPDVFVGIDAPDFNITLEGRLKQHGIRTIHYV
SPSVWAWRQKRVFKIGKATDLVLAFLPFEKAFYDRFNVPCRFIGHTMADAMPLQPDKLAA
RATLGIAPDARCLALLPGSRGAEVEMLSADFLKTAQLLRTRYPGLEVVVPLVNAKRREQF
ERIKAEVAPELTVHLLNGQGREAMIASDAALLASGTAALECMLAKCPMVVGYRMKPFTFW
LAQRLVKTPYVSLPNLLAGREIVTELLQHDCVPDKLAAALMPLLEDSPQTEDLKQTFLTL
HQSIRCGADEQAAQAVLELAKA
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatcgtccattgactatcggattggtcgccggagaaacttccggtgatattctt
ggcgccggtttaatccgagcgctcaaggcgcagatccccgacgcgcgttttgttggcgtc
gccggcccgctgatgcaggctgaaggctgcgaaacctggtacgaaatggaagagctggcg
gtaatgggcgtggtggaagtgcttgagcgcttgccacgcctgttgaagatccgcaaggat
cttacccgccggttcagtgaattgaagccggacgtgtttgtcggcatcgatgcgcccgac
ttcaatatcacgctggaaggccgtctcaagcagcacggtatccgcactatccactatgtc
agtccgtcggtctgggcctggcgtcagaagcgcgttttcaaaattggcaaagccaccgat
ctggtgttggcatttctccctttcgaaaaagcgttttacgatcgtttcaacgttccctgt
cggtttatcggccacaccatggccgacgccatgccgctgcagccggacaaactggccgca
cgcgctacgctgggcatagcccctgatgcacgctgccttgccttgttgcctggcagccgt
ggtgcggaggtcgagatgctgagcgctgacttcctgaagaccgcccaactgcttcgcacc
cgttatcctgggctggaagtggtagtgccgctggttaacgccaaacggcgtgaacagttc
gaacgtatcaaggctgaagtggcgccggaactgaccgttcacctgctgaatggccagggc
cgtgaggcaatgatcgccagcgatgcggcattgctggcctcgggtaccgcagcgctggag
tgtatgctggccaaatgcccgatggtggtgggttaccgcatgaagccgtttaccttctgg
ttggcgcagcggttggtgaagacgccgtatgtctcactgcctaacctgctggccgggcgt
gaaatcgtcaccgaactgttgcagcacgactgtgtgccggacaaactggcggcggccctg
atgccgttgctggaagacagcccgcagaccgaagatctgaaacagacgttccttaccttg
caccaaagcatccgttgcggtgctgatgaacaggccgctcaggctgtgttggagctggca
aaagcatga
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