Serratia plymuthica 4Rx13: SOD_c37700
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Entry
SOD_c37700 CDS
T02710
Symbol
gcvA
Name
(GenBank) glycine cleavage system transcriptional activator
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
srl
Serratia plymuthica 4Rx13
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srl03000
]
SOD_c37700 (gcvA)
Transcription factors [BR:
srl03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SOD_c37700 (gcvA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
Motif
Other DBs
NCBI-ProteinID:
AGO56723
LinkDB
All DBs
Position
complement(4241905..4242822)
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AA seq
305 aa
AA seq
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MSKRLPPLNALRVFDAAARHLSFTKAAEELFVTQAAVSHQIKSLEDFLGLKLFRRRNRSL
LLTEEGQSYYLDIKEIFSSINEATRKLQARSAKGALTVSLPPSFAIQWLVPRLSGFNSAY
PGIDVRIQAVDREEEKLADDVDVAIFYGRGNWPGVRAERLYAEYLLPVCSPSLLTGEHAL
KVTDDLAYHTLLHDTSRRDWLAYTRQLGLQHINVQQGPIFSHSAMVVQAAVHGQGVALVN
NVMAQTEIEAGRLVCPFNDVLVSKNAFYLVCHDSQAELGKIAAFRQWILARAASEQEKFR
FRYEQ
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaacgcttaccacctctcaatgcgctgcgggtcttcgacgcggcggctcgccac
ctgagttttaccaaagcggcagaagagctgttcgttacccaggctgccgtgagccatcag
atcaagtcgctggaggacttcctcggcctgaagctgtttcggcggcgcaatcgctcgctg
ctgctgacggaagaagggcaaagttattacctggatatcaaggaaatcttctcttcgatc
aacgaagctacccgcaagttgcaggcgcgcagtgccaagggggcattaaccgtcagtttg
ccgccgagtttcgccattcagtggttggtgccaaggctctctggctttaactcagcttat
ccggggatagacgtgcgcatccaggcggtggaccgtgaggaagagaagctggcggacgat
gtcgatgtagcgattttttatggtcgcggcaattggccaggggtgcgcgccgaacgttta
tacgcggaatatctgttgcctgtgtgttcacccagcctgctgaccggggaacatgcgtta
aaagtgacggacgatctggcttatcacacgctactgcatgatacttcacgccgcgattgg
ctggcttatacgcgacagttgggattgcagcacattaatgtgcaacaggggccgattttc
agccacagcgcaatggtggttcaggctgcggttcatggtcagggagtggcgctggtgaat
aacgtgatggcgcaaactgaaatcgaagccgggcggctggtttgcccgtttaacgatgta
ctggtcagtaaaaacgctttttatctggtatgccatgacagccaggcagaactgggtaaa
atagccgcctttcgtcagtggatcctggcacgggcagccagcgagcaggaaaaattccgc
tttcgctatgaacaataa
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