Serratia plymuthica 4Rx13: SOD_c38440
Help
Entry
SOD_c38440 CDS
T02710
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase LysS
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SOD_c38440 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
srl01007
]
SOD_c38440 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
srl03016
]
SOD_c38440 (lysS)
Enzymes [BR:
srl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
SOD_c38440 (lysS)
Amino acid related enzymes [BR:
srl01007
]
Aminoacyl-tRNA synthetase
Class II (A)
SOD_c38440 (lysS)
Transfer RNA biogenesis [BR:
srl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SOD_c38440 (lysS)
Prokaryotic type
Other AARSs
SOD_c38440 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
AGO56795
LinkDB
All DBs
Position
complement(4333759..4335276)
Genome browser
AA seq
505 aa
AA seq
DB search
MSEQQPQGADQALELNNELQSRREKLAGLRENGIAFPNDFRRDTTSDKLHAAYGDKDNEE
LEALGVEVTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLAEGVYNEQFKKWDLGD
ILGARGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDES
RNTFKVRSQVMAGIRNFMVERGFMEVETPMMQVIPGGASARPFVTHHNALDIDMYLRIAP
ELYLKRLVVGGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIELTESLFRT
LTQDVLGKTQVQYGDEVFDFGKPFEKLTMTEAIKKYRPETDLADLADMGKAVAIAESIGI
KIEKSWGLGRVVTEIFEEVAESHLIQPTFITEYPAEVSPLARRNDENPEITDRFEFFIGG
REIGNGFSELNDAEDQAQRFADQVNAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID
RMVMLFTNSHTIRDVILFPAMRPQK
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagcaacaaccacagggcgccgatcaggcgttggaactcaataacgagttgcag
tcacgccgtgagaaactggccgggctgcgcgagaacggcattgcgttcccgaatgatttc
cgtcgcgacaccacgtccgacaagctgcacgctgcatacggcgataaagataacgaagag
ctggaagcgctgggcgtagaagttaccgttgcaggccgcatgatgacccgtcgtatcatg
ggtaaagcgtcattcgtgacgctgcaggacgtcggtggccgtattcagctttacgtcgcg
cgcgacgatctggcggaaggcgtttataacgagcagttcaagaagtgggatctgggcgat
atccttggcgctcgcggcaagctgttcaaaaccaagaccggcgagctgtctattcactgt
accgaactgcgcctgctgaccaaggccctgcgcccgttgccggacaagttccacggtctg
gccgatcaggaaacccgttatcgccagcgttatctggatctgatcgccaacgatgaatcg
cgcaacaccttcaaggtgcgttctcaggtgatggcggggatccgcaacttcatggtggaa
cgcggcttcatggaagtcgaaaccccaatgatgcaggtgatcccgggcggcgcttctgcg
cgtccattcgtgactcaccacaatgcgctggacatcgatatgtacctgcgtattgccccg
gagctgtacctgaagcgtctggtggtcgggggcttcgagcgggtgttcgaaatcaaccgt
aacttccgtaacgaaggcgtttctccgcgccataacccagagttcaccatgatggaactc
tatatggcttacgcggattacaaagacctcatcgagctgacagagtcgctgttccgcacc
ctgactcaggacgtgctgggcaaaactcaggtacagtacggtgacgaagtgttcgatttc
ggcaagccgtttgaaaaactgaccatgaccgaggcgatcaaaaaataccgtccggaaacc
gatttggccgatctggctgacatgggcaaggcggtggctatcgctgaatccatcggcatc
aagattgagaagagctggggtctgggccgtgtagtcaccgagatcttcgaagaagtggcg
gaaagccacctgattcagccgaccttcattaccgaatacccggcggaagtgtccccgctg
gcgcgccgtaatgatgagaacccggaaatcaccgaccgtttcgagttcttcattggcggg
cgtgaaatcggtaacggcttctccgagctgaacgacgcggaagaccaggcgcagcgcttt
gctgaccaggtgaatgcgaaagacgcaggcgatgacgaagcgatgttctatgacgaagac
tacgtcactgcgctcgagcacggcctgccgccgacggcaggcttgggtatcggtatcgat
cgcatggttatgttgttcaccaacagccacaccattcgcgatgtgattctgttcccggcg
atgcgcccgcagaaatga
DBGET
integrated database retrieval system
