Serratia plymuthica 4Rx13: SOD_c39580
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Entry
SOD_c39580 CDS
T02710
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase LpdA
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl00010
Glycolysis / Gluconeogenesis
srl00020
Citrate cycle (TCA cycle)
srl00260
Glycine, serine and threonine metabolism
srl00280
Valine, leucine and isoleucine degradation
srl00310
Lysine degradation
srl00380
Tryptophan metabolism
srl00620
Pyruvate metabolism
srl00630
Glyoxylate and dicarboxylate metabolism
srl00640
Propanoate metabolism
srl00670
One carbon pool by folate
srl00785
Lipoic acid metabolism
srl01100
Metabolic pathways
srl01110
Biosynthesis of secondary metabolites
srl01120
Microbial metabolism in diverse environments
srl01200
Carbon metabolism
srl01210
2-Oxocarboxylic acid metabolism
srl01240
Biosynthesis of cofactors
Module
srl_M00009
Citrate cycle (TCA cycle, Krebs cycle)
srl_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
srl_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
srl_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
SOD_c39580 (lpdA)
00020 Citrate cycle (TCA cycle)
SOD_c39580 (lpdA)
00620 Pyruvate metabolism
SOD_c39580 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
SOD_c39580 (lpdA)
00640 Propanoate metabolism
SOD_c39580 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SOD_c39580 (lpdA)
00280 Valine, leucine and isoleucine degradation
SOD_c39580 (lpdA)
00310 Lysine degradation
SOD_c39580 (lpdA)
00380 Tryptophan metabolism
SOD_c39580 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SOD_c39580 (lpdA)
00670 One carbon pool by folate
SOD_c39580 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
srl04147
]
SOD_c39580 (lpdA)
Enzymes [BR:
srl01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
SOD_c39580 (lpdA)
Exosome [BR:
srl04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
SOD_c39580 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
FAD_oxidored
Pyr_redox_3
GIDA
FAD_binding_2
HI0933_like
AlaDh_PNT_C
NAD_binding_8
Thi4
FAD_binding_3
DAO
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
AGO56909
LinkDB
All DBs
Position
complement(4464738..4466162)
Genome browser
AA seq
474 aa
AA seq
DB search
MSTEIKTQVVVLGAGPAGYSAAFRCADLGLETVLVERYSTLGGVCLNVGCIPSKALLHVA
KVIEEAKALAEHGIVFGEPKTDIDKVRVWKEKVINQLTGGLAGMAKGRKVKVVNGLGKFT
GANTLVVEGENGPTTINFDNAIIAAGSRPIQLPFIPHEDPRVWDSTDALELKTVPERLLV
MGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDVVKVFTKRISKQFNLMLETKVTA
VEAKEDGIYVTMEGKKAPAEPQRYDAVLVAIGRVPNGKLLEAGKAGVEVDERGFIRVDKQ
LRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVIAGMKHYFDPKVIPSIAYTEPEVAWV
GLTEKEAKEKGISYETSTFPWAASGRAIASDCADGMTKLIFDKETHRIIGGAIVGTNGGE
LLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEIFEGSITDLPNPKAKKK
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagtactgaaattaaaactcaggtcgtggtacttggggcgggcccggcaggttactct
gctgcctttcgttgcgctgacttaggtcttgaaaccgttctggttgaacgttattccacg
ctgggcggtgtttgcctgaacgtgggatgtatcccttccaaagcactgctgcacgttgcc
aaagtgatcgaagaagccaaagcgctggccgagcacggcatcgttttcggcgagccgaaa
accgacatcgacaaagtgcgcgtctggaaagaaaaagtcatcaatcagctgaccggcggt
ctggctggcatggctaaaggccgtaaagttaaagtcgttaacggtctgggcaagttcacc
ggcgctaacaccctggtcgttgaaggcgaaaatggtcctactaccatcaacttcgacaac
gccatcatcgccgcaggctcccgtccgatccaactgccattcattcctcatgaagacccg
cgcgtgtgggactctaccgatgcgctggaactgaaaaccgtccctgagcgtctgttggtg
atgggcggcggtattatcggcctggaaatgggtaccgtataccatgcgttgggttcacag
atcgacgtggtcgagatgtttgaccaggtgatcccggctgccgacaaagacgtggtgaaa
gtcttcaccaaacgcatcagcaagcagttcaacctgatgctggaaaccaaagtgactgcg
gtagaagccaaagaagacggcatctacgtcactatggaaggcaaaaaagcgcctgcagaa
ccacagcgttacgacgcggtgctggtggctatcggccgtgtgccgaacggcaaactgctg
gaagcgggcaaagccggtgtggaagttgacgaacgtggctttatccgcgtagacaaacag
ctgcgcaccaacgtgccgcacatcttcgctatcggcgacatcgtcggtcaaccgatgctg
gcgcacaaaggcgtgcatgaaggccacgttgccgctgaagttatcgccggcatgaagcac
tacttcgacccgaaagtgatcccatcaatcgcttacaccgagccggaagttgcatgggtg
ggtctgaccgagaaagaagcgaaagagaaaggcatcagctacgaaacgtccaccttcccg
tgggcagcttccggccgtgctatcgcttccgattgcgcagacggcatgaccaaactgatc
ttcgacaaagaaactcaccgtatcatcggtggcgcgattgtcggcaccaacggcggcgag
ctgctgggcgaaatcggtctggctatcgagatgggttgtgatgcggaagacattgcgctg
accatccatgctcacccaaccctgcacgaatccgtaggcttggcggcagagatcttcgaa
ggcagcatcaccgatctgccaaacccgaaagccaagaagaagtaa
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