Serratia plymuthica 4Rx13: SOD_c39790
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Entry
SOD_c39790 CDS
T02710
Symbol
yggR
Name
(GenBank) YggR
KO
K02669
twitching motility protein PilT
Organism
srl
Serratia plymuthica 4Rx13
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
srl02044
]
SOD_c39790 (yggR)
02035 Bacterial motility proteins [BR:
srl02035
]
SOD_c39790 (yggR)
Secretion system [BR:
srl02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
SOD_c39790 (yggR)
Type IVa pilus homolog protein
SOD_c39790 (yggR)
Bacterial motility proteins [BR:
srl02035
]
Pilus system
Twitching motility proteins
SOD_c39790 (yggR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
TrwB_AAD_bind
AAA_22
AAA_16
AAA_14
AAA_29
FtsK_SpoIIIE
ResIII
DUF87
AAA_30
DUF3313
AAA
Zeta_toxin
AAA_23
SLFN-g3_helicase
AAA_33
KAP_NTPase
AAA_19
nSTAND3
NTPase_1
NPHP3_N
ABC_tran
cobW
Viral_helicase1
NACHT
SRP54
Microtub_bd
AAA_18
PRK
ATP_bind_1
RNA_helicase
DAP3
AAA_7
KTI12
AAA_25
HEAT_EZ
Motif
Other DBs
NCBI-ProteinID:
AGO56930
LinkDB
All DBs
Position
complement(4490505..4491509)
Genome browser
AA seq
334 aa
AA seq
DB search
MDIDEFMALSVKHNASDLHLCAGHQPMLRIDGELQPLEGAEILTQERMHQLCGTLLQPPQ
RQLLQQHGQLDLALTLAGDIRLRANFFLQSLGISIALRLIAGHCPTLAALAAPAIVPALL
RREDGLILVTGATGSGKSTTLAAMIDDINQHQRRHVITLEDPIEFMHHSRKSLIQQRELG
RDSHSFDEALRAALREDPDVILLGELRDTTTIRLALTAAETGHLVLATLHTRSAPQAVDR
LVDVFPAEEKPYVRAQLAASLQAVIAQKLLSSPGGGRVAIFEVLTATAAVSSMIREGKTH
QLASVLQTGAQSGMQTFEQGLQQRIDAGLLGDSV
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggatatcgacgaattcatggcccttagtgtaaagcataatgcttccgatctgcacctt
tgtgcgggccatcaacccatgttgcgcattgatggtgaactgcaaccgctggaaggggcg
gaaatactgactcaggagcgaatgcaccagctgtgcggcacgctgctgcaaccgccgcag
cgacagcttttacagcagcatgggcagctcgatctggcgttgacgctggcgggcgatatc
cggctgcgcgccaatttctttttgcaaagcctggggatatccatcgcgctgcggttgatc
gccggccactgcccgacgctggcggcgttagcggcaccggccattgtccccgcgctgctg
cggcgtgaggatggtctgatattggtcaccggcgcgaccggcagcggtaaatccaccacg
ctggcggcgatgattgacgacatcaatcagcatcaacgccggcatgtcatcacgctggaa
gacccgatcgaatttatgcaccatagccggaagtcgttgattcaacagcgcgaactgggc
cgcgatagccacagttttgacgaagcgctacgcgccgcgctgcgtgaagatccggatgtg
atcctgttgggagaactgcgtgacaccaccaccatccgtctggcgctcaccgcggcggaa
accggccatttggtgctggcgacgctgcatacccgcagcgcgccgcaggcggtggatcgt
ttggtagacgttttcccggcagaagaaaagccttatgtgcgcgcacagctggctgccagc
ctgcaggcggtgattgcgcaaaagctgctaagcagtcctggtggcgggcgggtggcaatc
tttgaggtgctgacggcgacggcggcggtcagcagcatgatccgcgaaggcaaaacccat
cagctcgccagcgtgctgcaaaccggcgcgcagtccggcatgcagacttttgaacagggt
ttgcagcagcggatcgacgccggtttgctgggtgatagcgtgtga
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