Serratia plymuthica 4Rx13: SOD_c41780
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Entry
SOD_c41780 CDS
T02710
Name
(GenBank) UpF0042 nucleotide-binding protein
KO
K06958
RNase adapter protein RapZ
Organism
srl
Serratia plymuthica 4Rx13
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srl03019
]
SOD_c41780
Messenger RNA biogenesis [BR:
srl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SOD_c41780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_22
FtsK_SpoIIIE
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AGO57127
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All DBs
Position
4715968..4716822
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AA seq
284 aa
AA seq
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MVLMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPQLANTLAERNISAAVSIDVRNM
PESPEVFEYAMTQLPDCFSPQLLFLDADRNTLIRRYSDTRRLHPLSTKNLSLESAIDEES
DLLEPLRSRADLLIDTSEMSVHELAEMLRTRLLGKRERELTMVFESFGFKHGIPIDADYV
FDVRFLPNPHWDPKLRPMTGLDKPVASFLDRHTEVHNFIYQTRSYLEQWLPMLETNNRSY
LTVAIGCTGGKHRSVYVAEQLADYFRSRGKNVQSRHRTLEKRKQ
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgatgattgtcagcggccgttccggttcagggaaatccgtcgccttgcgggcg
ctggaagacatgggtttttactgcgttgataacctgcccgtggtactgctgccgcagctt
gccaatacgctggcggaacgcaacatatccgcagcggtaagcatcgacgtgcgtaacatg
ccggaatcgccggaagtgtttgaatatgcgatgacccaattgccggactgcttttctccg
caattgctgttcctcgacgccgaccgtaataccctgattcgccgctacagtgatacccgc
cgcctgcatccgctctccaccaagaacctgtcgctggaaagcgcgatcgatgaagaaagc
gatctgcttgagccgttgcgctcaagggccgatctgctcatcgacacgtcggaaatgtcg
gtgcatgagctggccgaaatgctgcgtacccgtctgttgggtaaacgcgaacgcgaactg
accatggtattcgaatccttcggctttaagcacggcatcccgatcgacgccgattacgtc
ttcgacgtacgcttcctgccgaacccgcactgggatccgaaactgcgcccgatgaccggc
ctggataaaccggtcgcctcgttcctcgatcgtcacactgaagtgcataactttatctac
cagacgcgcagctatctggaacagtggctgccgatgctggaaaccaacaaccgcagctac
ctgacggtggcgattggctgtaccggcggtaaacaccgttccgtctacgtagccgaacag
ttggccgactacttccgctcacgcggcaagaatgtgcaatcgcgccaccggacgctggaa
aaacgtaaacaatga
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