Serratia plymuthica 4Rx13: SOD_c42020
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Entry
SOD_c42020 CDS
T02710
Symbol
aaeR
Name
(GenBank) HTH-type transcriptional activator AaeR
KO
K21698
LysR family transcriptional regulator, transcriptional activator for aaeXAB operon
Organism
srl
Serratia plymuthica 4Rx13
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srl03000
]
SOD_c42020 (aaeR)
Transcription factors [BR:
srl03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SOD_c42020 (aaeR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
AGO57151
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Position
4738417..4739328
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AA seq
303 aa
AA seq
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MERLKRMSVFAKVVECGSFTAAARQLDMSVSSISQTVSKLENELQVKLLNRSTRRIGLTE
AGKIYYQGCRRMLQEVSEVHEQLYAFNNTPTGTLRIGSSSTMAQNVLATMTADMLKEYPG
LTVNLVTGIPAPDLIADGLDVVIRTGALQDSSLFSKRLGSMPMVICAAKSYLSQHGTPQK
PSDMVNFSWLEYSVRPDSEFELIAPEGITTRISPQGRFVTNDSQTMIRWLKAGAGIAYAP
LMWVIEEIKRGEIEILFKSYHSDPRPVYALYTEKDKLPLKVQVCIDYLTEYFKRVAEVYQ
GYR
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggaaagactaaaacggatgtcggtgttcgcaaaagtcgttgaatgcgggtcatttacg
gcggctgcgcgccagcttgatatgagcgtttcgtctatcagccagaccgtctccaaactg
gagaatgagctgcaggtcaagctgctcaaccgcagcacgcgccgcattggcctgacggaa
gccgggaaaatttactatcagggctgccggcgcatgctgcaggaagtgagcgaggtgcac
gaacagctgtacgcgtttaacaatacgccgaccggcacgctgcgcatcggcagttcgtcc
accatggcgcaaaacgtgctggcgaccatgaccgccgatatgctgaaggaatatcccggt
ctgacggtgaacctggtgaccggcattccggcgccggacctgattgccgacgggctggat
gtggtgatccgcaccggcgcgctgcaagattccagtctgttctccaaacgcctcggttca
atgccgatggtgatatgcgccgctaaaagttacctcagccagcacggcacgccgcagaaa
cccagcgacatggtcaacttttcctggctggaatacagcgtgcggcctgacagcgaattc
gaactgatcgcgcccgaaggcatcaccacgcgcatctcgccgcaagggcgctttgtcacc
aacgattcgcaaaccatgatccgctggctgaaagccggagccggcatcgcctatgcaccg
ctgatgtgggtgatcgaagagatcaaacgcggcgagatcgagatcctgttcaaaagctat
cactcggatcctcgcccggtgtacgccctgtacaccgagaaagacaagctgccgcttaag
gtacaggtgtgcatcgactacctgacggagtacttcaagcgcgtggcggaagtctatcag
ggctatcgctga
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