Serratia plymuthica 4Rx13: SOD_c42970
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Entry
SOD_c42970 CDS
T02710
Name
(GenBank) extracellular solute-binding protein family 1
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SOD_c42970
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srl02000
]
SOD_c42970
Transporters [BR:
srl02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
SOD_c42970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
AGO57246
LinkDB
All DBs
Position
complement(4848310..4849371)
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AA seq
353 aa
AA seq
DB search
MKRLCASVLTSAIVLTSQMSWAADPDLAALEQAAKKEGEVNSVGMPDSWANWKDTWQDLQ
SKYGLKHLDTDMSSAQEIAKFDAEKGNATADIGDVGAAFGPIAVQKGVTQPYKPSTWEQV
PGWAKDKDGHWALAYTGTIAFIINKQQVKEIPHSWADLLKGTYQVTIGDVGTASQAASGV
LAATYAMGGNEKNLKPGLEFFGKLAKAGRLSLSNPVIASLEKGEVQVGVVWDFNGLNYRD
QIDKTRFEVLIPSDGSITSGYTTIINKFAKHPNAAKLAREYIFSDAGQINLARGYARPIR
AEHLTLPDDVKAKLLPAEQYKNAHPIADPAAWEQSAKTLPRQWQENVIMFMQQ
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtttgtgcgcttctgtgttaaccagtgccattgtactgaccagccagatgagc
tgggccgcggatcccgatctggctgcgctggagcaggccgccaagaaggaaggtgaagtc
aacagcgtcggcatgccggacagctgggccaactggaaagacacctggcaggatctgcag
agcaagtacggcttgaagcatctcgataccgacatgagctcggcgcaggaaatcgccaag
ttcgacgcggaaaagggcaatgccacggccgatatcggtgacgtgggcgcggcattcggc
cccatcgcggtgcaaaaaggggtaacccaaccttataagccgtccacctgggagcaggtg
cctggctgggcgaaagacaaggatggccattgggcgctggcctataccggcaccatcgcc
ttcattatcaacaaacagcaggtgaaagagatcccgcacagctgggccgatctgctgaaa
ggcacttatcaggtcaccatcggtgacgtcggtaccgcctcgcaggcggcaagcggcgtg
ctggcggccacttacgccatgggcggcaacgagaaaaacctgaagccgggtctggagttc
ttcggcaagttggccaaggcagggcgcctgagcctgagcaacccggtgatcgcctcgctg
gaaaaaggcgaagtgcaggtcggcgtggtgtgggactttaacggcctgaactaccgcgac
cagatcgacaaaacccgttttgaagtgttgatcccgtccgacggctcaatcacgtcaggc
tacaccaccatcatcaacaaattcgccaaacacccgaacgccgccaagctggcgcgtgaa
tacatcttctccgacgccggtcagatcaacctggcacgcggctatgctcgcccgatccgt
gcggaacacctgacgctgccggacgacgtaaaagccaagctgttgccggccgaacagtat
aaaaacgcccacccgatcgccgatccggcggcctgggagcaaagcgccaaaacgctgccg
cgccagtggcaggaaaacgtcattatgtttatgcagcagtga
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