Serratia plymuthica 4Rx13: SOD_c43170
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Entry
SOD_c43170 CDS
T02710
Symbol
rimN
Name
(GenBank) tRNA threonylcarbamoyladenosine biosynthesis protein RimN
KO
K07566
L-threonylcarbamoyladenylate synthase [EC:
2.7.7.87
]
Organism
srl
Serratia plymuthica 4Rx13
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
srl03009
]
SOD_c43170 (rimN)
03016 Transfer RNA biogenesis [BR:
srl03016
]
SOD_c43170 (rimN)
Enzymes [BR:
srl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.87 L-threonylcarbamoyladenylate synthase
SOD_c43170 (rimN)
Ribosome biogenesis [BR:
srl03009
]
Prokaryotic type
Other maturation factors
SOD_c43170 (rimN)
Transfer RNA biogenesis [BR:
srl03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
SOD_c43170 (rimN)
Prokaryotic type
SOD_c43170 (rimN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sua5_yciO_yrdC
EAD11
Toxin-deaminase
Motif
Other DBs
NCBI-ProteinID:
AGO57260
LinkDB
All DBs
Position
complement(4873630..4874199)
Genome browser
AA seq
189 aa
AA seq
DB search
MSSEFTSILTPIIDALRNQQVIAYPTEAVFGLGCDPDSGQAVNALLALKQRPWEKGLILI
AADYSQLTSYIDDGALSEQQRAAMFATWPGPVTWVIPARPETPRLLTGRFNSLAVRVSDH
PLVQQLCRQFGKPLVSTSANLSGQEPCRSADEVMQQFGSAFPVLAGSVGGRLNPSEIRDV
LTGELIRQG
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgagctctgaattcacttctatcttaacgccaataattgacgcattgcgtaaccagcag
gtcattgcttaccctaccgaggcggtatttggcctggggtgcgatcctgatagtggacag
gcggtcaatgccttattggcattgaaacagcgcccctgggaaaaagggctgatcctgatt
gcggccgattattcgcagctaacatcctatatcgacgatggcgcccttagcgaacagcag
cgcgctgcgatgtttgccacttggccaggtccggtgacctgggttattcccgcacggcct
gaaacgccgcggctgctgaccgggcgtttcaattcattggcggtgcgcgtcagcgatcat
ccattggtgcaacaactgtgccggcagtttggcaaaccgttggtgtcgaccagcgctaat
ctcagcggacaagagccttgccgcagcgccgatgaggttatgcaacagtttggctccgcg
tttccggtgttagccggcagtgttggtggccgtcttaatccttccgaaatcagagatgtc
ctgaccggtgagttgatccgtcagggctag
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