Serratia plymuthica 4Rx13: SOD_c43950
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Entry
SOD_c43950 CDS
T02710
Symbol
nirB
Name
(GenBank) nitrite reductase [NAD(p)H] large subunit NirB
KO
K00362
nitrite reductase (NADH) large subunit [EC:
1.7.1.15
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl00910
Nitrogen metabolism
srl01100
Metabolic pathways
srl01120
Microbial metabolism in diverse environments
Module
srl_M00530
Dissimilatory nitrate reduction, nitrate => ammonia
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
SOD_c43950 (nirB)
Enzymes [BR:
srl01000
]
1. Oxidoreductases
1.7 Acting on other nitrogenous compounds as donors
1.7.1 With NAD+ or NADP+ as acceptor
1.7.1.15 nitrite reductase (NADH)
SOD_c43950 (nirB)
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Motif
Pfam:
Pyr_redox_2
Fer2_BFD
Pyr_redox
NIR_SIR
NIR_SIR_ferr
Pyr_redox_3
Rubredoxin_C
GIDA
AlaDh_PNT_C
Lys_Orn_oxgnase
FAD_binding_3
NAD_binding_8
Trp_halogenase
Motif
Other DBs
NCBI-ProteinID:
AGO57338
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Position
4935747..4938296
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AA seq
849 aa
AA seq
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MSRVKLAVIGNGMVGHRFIEDLLEKADKDQFEITVFCEEPRIAYDRVHLSSYFAHHTAEE
LSLVREGFYEKQGVKVLVGERAITINRSEKVIHSNTGRTLYYDKLIMATGSYPWIPPIKG
SESQDCFVYRTIEDLNAIEACARRSKRGAVVGGGLLGLEAAGALKSLGVETHVIEFAPML
MAEQLDPMGGDQLRRKIERMGVKVHTGKNTKEIVNGGEQARKTMQFADGTELEVDFIVFS
TGIRAQDKLAHQCGLATARRGGIVINDSCQTSDPDVYAIGECASWHERTFGLVAPGYKMA
QVTADHLLGRENAFQGADMSAKLKLLGVDVGGIGDAHGRTEGARSYVYLDESKEVYKRII
VSADNKTLLGAVLVGDTSDYGNLLQLTLNAIELPENPDGLILPAHAGSKPAIGVDSLPDT
AQICSCFDVTKGDIVKAVGMGCHTVAAIKSETKAGTGCGGCIPLITQVLNAELSKQGIEV
NHHLCEHFAYSRQELYHLIRVEGIKSFDALLAKYGKGYGCEVCKPTVGSLLASCWNEFVL
KPQHTPLQDTNDNFLGNIQKDGTYSVIPRSAGGEITPDGLMAVGQIAKEYNLYTKMTGSQ
RIGMFGAQKDDLPAIWSKLIAAGFETGHAYAKALRMSKTCVGSTWCRFGVGDSVGFGVKL
EHRYKGIRTPHKMKFGVSGCTRECAEAQGKDVGIIATENGWNLYVCGNGGMKPRHADLLA
ADLDSATLERYLDRFMMFYIRTADKLQRTSVWLESLEGGIDYLRKVIIDDKLGINDQLET
EIARLRDAVICEWKEAVEDPQAQVRFAHFINSSLRDPNVQIVAEREQHRPARPDERIPVT
LLDAEESNV
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgagcagagtcaaacttgctgtcatcgggaatggcatggtcggccaccggtttatcgaa
gatctgctggaaaaagcggacaaagaccagtttgagatcaccgtgttttgtgaagaaccg
cgcatcgcctatgaccgcgtgcacctgtcttcttatttcgcccaccatactgccgaagaa
ctttcgctggtacgcgaaggcttttacgaaaaacagggggtgaaggtattggttggcgag
cgcgccattaccatcaaccgcagtgagaaggtcattcactccaataccggccgcaccctt
tactacgacaagctgatcatggccaccggctcctacccgtggatcccgccgattaaaggc
tcggaaagccaggattgcttcgtctaccgcaccattgaagatctgaacgccatcgaagcc
tgcgcacgccgcagcaaacgcggtgcggtggttggcggcggcctgctggggctggaagcc
gccggtgcgctgaaaagcctgggggtcgaaacccacgtcattgaattcgccccaatgctg
atggccgaacagctcgatcctatgggcggcgatcagttgcgccgcaagatcgaacgcatg
ggcgtcaaagtgcataccggtaaaaatacgaaagagatcgtcaacggcggggaacaggcg
cgcaaaaccatgcagttcgccgacggcaccgagctggaagtggactttatcgtgttttca
accggtatccgcgctcaggacaagctggctcaccagtgtggtctggcgaccgcccgccgt
ggcggtatcgtaattaacgatagttgccaaacctccgatccggacgtttacgccatcggc
gagtgcgcctcctggcatgagcgcaccttcggtctggtggcgccgggctataaaatggcg
caggtcacggccgatcatctgctgggccgtgaaaatgccttccagggcgccgacatgagc
gccaagctgaagctgctgggcgtagacgttggcggcattggcgatgcccacggtcgcact
gaaggcgcacgcagctacgtttatctggatgaaagcaaagaagtctataagcgcatcatc
gtcagcgccgacaataaaaccctgctcggcgccgtgttggtgggcgataccagcgactac
ggcaatttgttgcaactgacgctgaacgccattgaactgccggaaaatccggacggcttg
atcctgccggcgcacgcaggcagcaaaccggccatcggcgtagattccttgccggacacc
gcgcaaatctgctcttgcttcgacgtcaccaagggcgacatcgtcaaggcggtcggcatg
ggttgccacaccgtcgcggcgataaaatcggaaaccaaggccggtaccggctgcggcggc
tgtattccgctgatcacccaggtgctgaacgccgagctgagcaaacagggcatcgaggtt
aaccaccatctgtgcgaacactttgcctattcgcgccaggagctgtaccacctgatccgc
gttgaaggcatcaagtccttcgacgcactgctggccaaatacggcaaaggttacggttgt
gaagtctgtaaaccgaccgtcggctcgctgctggcttcctgctggaatgaattcgtgctc
aaaccgcagcacacgccgctgcaggacaccaacgacaacttcctcggcaatatccagaaa
gacggcacttattcggtgatcccacgctccgccggcggtgaaattacgccggacgggctg
atggcggtcggccagattgccaaggaatacaatctgtataccaagatgaccggttctcag
cgcatcggcatgttcggtgcgcagaaagacgacctgccggctatctggagcaagctgatt
gccgccggttttgaaaccggccatgcctacgccaaggcgttgcgcatgtcgaaaacctgt
gtcggcagcacctggtgtcgctttggcgtgggtgacagcgtcgggtttggcgtcaaactg
gaacaccgctacaaaggcatccgcacgccacacaaaatgaagttcggggtttccggctgt
acccgcgaatgcgctgaagcgcagggcaaggacgtcggcatcatcgccaccgagaacggc
tggaacctgtacgtatgcggtaacggcggcatgaagcctcgccacgccgacctgctggcg
gcggatctcgacagcgctacgctggaacgctatctggaccgtttcatgatgttctacatc
cgcaccgccgataagctgcaacgcacctcggtgtggctggagagccttgaaggcggcatc
gattatctgcgcaaggtgatcattgacgacaaactgggcatcaacgatcagttggaaacc
gaaatcgcccgcctgcgcgatgcggttatctgcgagtggaaagaagccgtcgaagatccg
caggcccaggtccgtttcgcccactttatcaacagcagcctgcgcgatcctaacgtacag
atcgtcgccgagcgcgaacaacatcggccggcgcgcccggatgaacgcattcccgtcacc
ctgctggacgcagaggagagcaacgtatga
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