Serratia plymuthica 4Rx13: SOD_c44500
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Entry
SOD_c44500 CDS
T02710
Symbol
gntR
Name
(GenBank) HTH-type transcriptional regulator GntR
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
srl
Serratia plymuthica 4Rx13
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srl03000
]
SOD_c44500 (gntR)
Transcription factors [BR:
srl03000
]
Prokaryotic type
Helix-turn-helix
LacI family
SOD_c44500 (gntR)
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GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
LacI
Peripla_BP_4
HTH_3
HTH_10
HTH_24
HTH_IclR
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AGO57393
LinkDB
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Position
complement(5004624..5005655)
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AA seq
343 aa
AA seq
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MNALSRLASSLIMKKKRPVLQDVADKVGVTKMTVSRYLRNPDQVSVALQQKIAVALDELG
YIPNRAPDILSNSTSRAIGVLLPSLTNQVFAEVLRGIESVTDAHNYQTMLAHYGYLPERE
EQRLTSLLSYNIDGLILSERHHTPRTLKMIEVAGIPVVELMDCVSPCIDLAVGFNNFEAA
RQMTQQIIARGHRHVVYFGARQDERTIIKQQGYEQAMRESGLEPYSVMTARSSSYSAGGE
LLRQAQRDYPQIDSIFCTNDDLAIGATFECQRQGLSIPDQMAIAGFHGHDIGQVMVPKLA
SVLTPRERMGQIGAERLLARLRGETVCPRMVDVGFTVIPGGSI
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccctttcacggttagccagttcattgataatgaagaaaaaacggccggtactt
caggatgttgcagacaaggttggcgtgaccaagatgacggtgagccgttatctgcgtaat
cccgatcaggtttctgtcgccttgcagcaaaaaattgccgtcgcgctggatgagctgggc
tacattcccaaccgtgcgccggatatcctttccaactcgaccagccgcgccattggcgta
ctgctgccgtcgttaaccaaccaggtgtttgccgaagtcttgcgcggtatcgagagcgtg
accgatgcgcacaattaccagaccatgctggcacactacggctatttgccggagcgtgaa
gagcagcgtctgacctcgctgctgtcttacaatatcgacggcctgattctgtccgaacgc
caccatactccgcgaaccctgaagatgatcgaggtagcgggcatcccggtggtggagctg
atggactgcgtgtcgccgtgcatcgatctagcggtgggcttcaataacttcgaagccgcg
cgccagatgacccagcaaatcatcgctcgcggccaccgtcacgtggtgtatttcggcgca
cgtcaggatgagcgcaccattatcaaacagcagggctatgagcaggcaatgcgcgagtcc
ggtctggagccgtacagcgtcatgaccgcgcgttcgtcgtcctattccgccggcggcgaa
ctgctgcgtcaggcgcagcgcgactatccgcaaattgacagtatcttctgcaccaacgat
gacctggcgattggcgccacctttgagtgccagcgtcaggggttgtcgatccccgatcag
atggcgattgccggtttccacggccacgatatcggtcaggtgatggtgccgaaactggcg
agcgtgctgacgccgcgtgaaaggatggggcaaatcggcgccgagcgtctgctggcgcgg
ttgcggggtgaaaccgtctgtccgcgtatggtagacgtgggttttaccgtaattcccggc
ggcagtatttga
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