Serratia plymuthica 4Rx13: SOD_c45660
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Entry
SOD_c45660 CDS
T02710
Symbol
hdfR
Name
(GenBank) HTH-type transcriptional regulator HdfR
KO
K23773
LysR family transcriptional regulator, flagellar master operon regulator
Organism
srl
Serratia plymuthica 4Rx13
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srl03000
]
SOD_c45660 (hdfR)
Transcription factors [BR:
srl03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SOD_c45660 (hdfR)
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Paralog
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
Motif
Other DBs
NCBI-ProteinID:
AGO57509
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Position
5137081..5137908
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AA seq
275 aa
AA seq
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MDTELLKTFLEVSRTRHFGRAAESLYLTQSAVSFRIRQLENQLGANLFTRHRNNIRLTPA
GERLLPYAESLMTTWQLAKKEVVRSLQHTELSIGATASLWEAYLTPWLQSLYQQREALQL
EARVALRHSLVKQLHERQLDLLITTEPPKMDELASQLLGNFSLRLFSSTLRDKHAPMPYI
KLEWGADFHPQESRMLESDNLPVLTTTSAHLTRQLLETTGGCAFLPSQWEKDYPQLVATP
EIPAIIRPLYAVWLQNSDQQPLIRQLLKIPLNTAA
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
gtggataccgaattactgaaaacctttttggaggtcagtagaacgcgtcactttggccga
gccgcggaatccttgtacttaacgcagtctgcggtcagtttccgcatccgccagttagaa
aaccaattaggcgcgaatttattcacccgtcaccgtaacaatattcgcctgacgcccgcc
ggagagcggcttctgccctatgctgagagcctgatgacaacctggcaattggcaaaaaaa
gaggtggtgcgttcgctgcagcataccgagttgtccatcggcgccaccgcatctttgtgg
gaggcctacctaaccccgtggctgcaatcgctctatcaacaacgtgaggcgctacaactt
gaggccagggttgcgctacggcattctttggtaaaacagctgcatgagagacagctcgat
ttgctcatcactaccgaaccgccaaagatggatgagctggccagccagctgctggggaat
ttctcgctgcggctattctcttctaccctgcgcgataagcatgcgccgatgccgtatatc
aagctggaatggggggccgactttcatccgcaagaaagccgcatgttggaaagcgataat
ctgccggtgcttaccaccacctcggcacacctgacccgccagttactggaaaccaccggc
ggctgcgccttcctgcccagccagtgggagaaggactatccacagttggtcgcgaccccc
gaaatcccggcgattatccgtccgctgtacgctgtgtggctgcaaaatagcgaccagcag
ccactcatccggcaattgctgaaaatacctttaaacaccgcagcctaa
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