Serratia plymuthica 4Rx13: SOD_c45690
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Entry
SOD_c45690 CDS
T02710
Symbol
ytfR
Name
(GenBank) putative ABC transporter ATP-binding protein YtfR
KO
K10820
galactofuranose transport system ATP-binding protein [EC:
7.5.2.9
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SOD_c45690 (ytfR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srl02000
]
SOD_c45690 (ytfR)
Enzymes [BR:
srl01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.9 ABC-type D-galactofuranose transporter
SOD_c45690 (ytfR)
Transporters [BR:
srl02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Galactofuranose transporter
SOD_c45690 (ytfR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
ABC_ATPase
AAA_29
RsgA_GTPase
AAA_23
AAA_22
AAA_30
TsaE
AAA_16
AAA_15
MMR_HSR1
FeoB_N
DUF2813
nSTAND6
AAA_27
DUF815
Ploopntkinase3
Motif
Other DBs
NCBI-ProteinID:
AGO57512
LinkDB
All DBs
Position
complement(5139921..5141435)
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AA seq
504 aa
AA seq
DB search
MAASQTTLLAIKGLSVEFPGVKALEEVDFTLQRGEIMALLGENGAGKSTLIKALTGVYQR
SAGEVLLEGKAIAPQSTAQAQALGIGTVYQEVNLLANISVAANLFIGREPTRFGLVDQKT
MLRRAQQLLLGYGLQLDVSQPLGNYSIAIQQIVAIARAVDLSAKVLILDEPTASLDAKEV
TMLLDILSQLRSQGIGMIFVTHFLDQVYRISDRITVLRNGRLVGTKPANDLPRLELVQMM
LGHAFDESLLKRGEHVPTDASPLVEFNGYGRRGMVEPFDLRIRPGEIVGLAGLLGSGRTE
TAQLIFGIKSHDSGNAKVEGRTVNIRTPRKAASLGFGYCPEDRKTDGIIGAATVRENIIL
ALQAQRGWLKPLSLREQTRIAESFIQLLGIRTPGPEQQIQYLSGGNQQKVLLSRWLATKP
RFLILDEPTRGIDVGAHAEIIRLIERLCDEGLALLVISSELEELAGYADRIVVLRDRKHV
TQLEHTAITVPAIMQAIAVQQGAG
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggccgcatcgcagaccacgttattggcgattaagggattatccgtcgagtttcctggc
gtaaaggcgctggaagaggttgatttcacgctacagcgcggagagatcatggcgctgttg
ggtgaaaacggcgcgggaaaatccacgctaatcaaagcgctgaccggggtttatcagcgt
tccgccggtgaagttctgctggagggcaaagccattgcgccgcaaagcaccgcgcaagcg
caggcgctggggattggtacggtttatcaggaagttaacttgctggcgaatatctcggtg
gccgccaatttgtttatcggccgcgaacctacccgtttcggcctggtcgatcaaaaaacc
atgctgcggcgggcccagcaacttttgctgggttatgggttgcagttggatgtcagccag
ccattaggcaattattcgattgcgatccagcagattgtcgctatcgcacgggcggtcgat
ctttcagccaaagtcctgatcctggatgaacccactgcgagcctggatgctaaagaagtc
accatgctgctggatattctcagtcaactgcgatcgcaggggataggcatgatctttgtc
acccatttcctcgatcaggtttaccgcatcagcgatcgcattaccgtgctgcgcaacggt
aggttggtgggtaccaagcctgccaacgacttgccacggctggagctggtccagatgatg
ctcggtcacgcctttgacgagtcgttgctcaagcggggcgagcatgtgccgacggatgcg
tctccgctggtcgaatttaacggctacgggcgtcgtggcatggttgaacccttcgatctg
agaataaggccgggtgagattgtcggattggccggtctgctcggttcggggcgcaccgaa
acggcccaactgatatttggcatcaaatcgcatgatagcggcaatgcaaaagtggagggc
cgcacggtgaatattcgtacgccgcgcaaagctgccagtcttggcttcggctattgcccg
gaggatcgtaaaaccgacggaattatcggtgctgcgacggtgcgagaaaatatcattctg
gctctgcaggctcagcgcggctggttaaaaccgctttcgctacgagaacaaacccgcatt
gccgagagttttatccaattgttgggtattcgcacgccgggcccggagcaacagatccaa
tacctgtccggagggaatcagcagaaggtgctgctgtcgcgttggttggcaaccaaaccc
cgttttctgatcctggatgaaccgacgcgcgggattgacgtcggtgcgcatgctgaaatc
attcggttgattgaaaggctgtgcgatgaagggttagcgctgctggtgatctcttctgag
ctggaggaattggcgggatatgccgaccgcatcgtggtattgcgcgacagaaaacacgtt
acgcagcttgagcatacggctattacggtacctgcgattatgcaggctattgctgtgcaa
cagggggcaggatga
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