Serratia plymuthica 4Rx13: SOD_c46010
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Entry
SOD_c46010 CDS
T02710
Symbol
cytR
Name
(GenBank) HTH-type transcriptional repressor CytR
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
srl
Serratia plymuthica 4Rx13
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srl03000
]
SOD_c46010 (cytR)
Transcription factors [BR:
srl03000
]
Prokaryotic type
Helix-turn-helix
LacI family
SOD_c46010 (cytR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_Crp_2
HTH_Tnp_ISL3
MarR_2
HTH_3
HTH_24
MerR
Motif
Other DBs
NCBI-ProteinID:
AGO57537
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Position
5177771..5178799
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AA seq
342 aa
AA seq
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MEHKKELPMATMKDVAEMAGVSTATVSRALMNPEKVSTPTRQKVEQAVLAVGYSPHALSR
NIKRNESRTILVIVPDICDPFFADVIQGIEQTAAQQGYLVLIGDCAQQNQQERTFVNLII
TKQIDGMLLLGSNLPFDASKEEQRNLPPMVMANEFAPELELPTVHIDNLTAAFEAVHYLH
QLGHKQIACVAGPEQMPLSHYRLQGYIQALRRNGINVESSYITRGDFTYEAGAQALAALM
AQPKPPTAIFCHSDVMAIGVLSQAKKMGLRVPQDLSIVGFDDIKLTQYCDPPLTTVAQPR
YEIGRQAMLLLLEQLHGQTVPSGSRLLDSELIIRGSTAAPKR
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
ttggaacacaagaaagaattacccatggcaaccatgaaagacgttgccgagatggcgggc
gtttcaacggcaaccgtgtcgcgcgcgctgatgaacccggagaaggtgtcaacgccgacg
cgtcagaaagtggagcaggccgtcttggccgtgggctactctcctcatgccctctcgcgc
aatatcaagcgcaatgaatctcgtaccattctggtgatcgtccccgacatttgcgatccg
ttcttcgccgacgtgatccaggggatcgagcagaccgcggcgcagcaaggctatctggtg
ctgattggcgattgcgctcagcaaaaccagcaggaacggaccttcgtcaatctgattatc
accaagcaaatcgacggcatgctgctgctcggctccaacctgcccttcgacgccagcaag
gaagagcagcgcaatctgccgccgatggtgatggccaacgagtttgccccggagctggaa
ctgccgacggtacacatcgataacctgaccgccgccttcgaggctgtacattatttgcac
cagctcggacacaagcaaatcgcctgtgtcgccggaccggaacagatgcctctcagccat
tatcggctgcaaggttacattcaggcgctacgtcgtaatggcattaacgtcgaaagcagc
tatattacccggggtgatttcacgtacgaagccggtgcgcaggcgctggcagcgctgatg
gcgcaaccaaaacccccgacggcaatattctgccacagtgacgtcatggcaatcggcgtg
ctgtcacaggcgaaaaaaatggggctgcgagtaccgcaggacctttccatcgtcggcttt
gacgacatcaagctgacgcagtattgcgatccgccgttaaccacggtggctcaaccgcgc
tatgagatcggccggcaagcgatgctgctgttgttggaacaactgcacggacagacagta
ccaagtggctcccggctattggacagtgaattaattatcagaggcagcaccgctgcccct
aaacgctag
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