Serratia plymuthica 4Rx13: SOD_c46450
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Entry
SOD_c46450 CDS
T02710
Name
(GenBank) hypothetical protein
KO
K02844
UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl00540
Lipopolysaccharide biosynthesis
srl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
SOD_c46450
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
srl01005
]
SOD_c46450
Lipopolysaccharide biosynthesis proteins [BR:
srl01005
]
Core region
SOD_c46450
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
Glyco_trans_4_4
GT4-conflict
Glyco_trans_1_2
Motif
Other DBs
NCBI-ProteinID:
AGO57581
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Position
5220794..5221921
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AA seq
375 aa
AA seq
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MKAFRLAIVRQKYRPDGGAERFVSRALEALEQQNLDLNVITREWQGETHPDWHIHLCNPI
KLGRISRERGFAEAARALWQKEKFDLVQSHERIPGCDIYRAGDGVHRRWLLQRARLLPDW
RRKWLFSNRYHRYVMCAERAMYAAPELKAVICNAEMIKQEIIDDFGVPADKITVIYNAID
NQKFLPATAEQRQQLRRQHQIPQQAHCLIFVGSGFERKGLAAAIRAVAATDSYLLVVGKD
KAEKRYQALAQSLGCGDRVRFMGVQKQTLPFYQAADALLLPTLYDPFPNVILEAMSCGLP
VITSTTCGGAEFIAQGQNGFVTDALDVPALVTAIKALPRQALGSAMGEAARARIMSATPA
HLSEQLISLYNRLLD
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcatttcgtttggcgatcgttcgtcaaaaataccgcccggacggtggtgccgag
cgtttcgtctcacgcgctctggaagcactggagcaacagaacctcgatctgaacgttatc
acccgcgaatggcagggtgaaacccatccggactggcatattcatttgtgcaatccgata
aagcttgggcgcatcagccgtgagcgcggttttgccgaggccgccagagcgctgtggcag
aaagagaaatttgatctggtgcagagccacgaacgtatccccggctgcgatatttaccgc
gccggcgatggcgttcaccgccgctggttgctgcaaagagcgcgtttgctgcccgactgg
cgccgcaaatggctgttctccaaccgctatcaccgttacgtaatgtgtgcggaacgtgcg
atgtatgccgcgccggaactgaaagcggtcatctgcaatgcggaaatgattaaacaggaa
atcatcgacgactttggggtcccggccgataaaatcacggtgatctacaacgccattgat
aatcaaaaatttctgccggccacggccgagcagcggcagcaattgcgtcggcaacaccag
atccctcaacaggcgcactgcctgatttttgtcggctccggctttgagcgcaaagggttg
gccgccgccatccgcgccgtcgcggccacggacagttatctgctggtcgtcggtaaagat
aaggctgaaaagcgctatcaggcgctggcacagtcactaggatgcggcgatcgggtgcgg
tttatgggcgtgcaaaaacagacgctgccgttctatcaggccgccgatgcactgctgttg
ccaacgctgtacgacccgttccctaacgtgattctggaggcaatgtcctgcggtctgccg
gtcatcaccagcaccacctgcggcggcgcggaatttatcgctcaagggcaaaacggcttc
gttaccgatgctctggatgtccccgccctcgtcacggcgatcaaggcattgccacgccag
gcactgggctccgccatgggtgaagccgcgagagcgcgtatcatgtctgccaccccggcg
cacctgtcggaacagttgatctccctttataaccggctgctggattaa
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