Serratia plymuthica 4Rx13: SOD_c46510
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Entry
SOD_c46510 CDS
T02710
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase MutM
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SOD_c46510 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srl03400
]
SOD_c46510 (mutM)
Enzymes [BR:
srl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SOD_c46510 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SOD_c46510 (mutM)
DNA repair and recombination proteins [BR:
srl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SOD_c46510 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
AGO57587
LinkDB
All DBs
Position
complement(5226735..5227544)
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AA seq
269 aa
AA seq
DB search
MPELPEVETSRRGIEPYLVGHSIQYAVVRNARLRWPVSEQILALSDRPVRSVQRRAKYLL
IELDHGWIIVHLGMSGSLRMLAEETEAGKHDHVDLVISNGMTLRYTDPRRFGAWLWCEDL
ANSNVLAHLGPEPLSEAFTGAYLYEKSRNKRTLIKPWLMDNKLVVGVGNIYASESLFTAG
ILPDRPAASLSKTEAELLVETIKAVLLRSIEQGGTTLRDFLQSDGKPGYFAQELQVYGRA
GEPCRACGTPIESAKHGQRSTFFCRRCQR
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccagaagttgagaccagccgacgtggtattgaaccttatcttgtcggc
catagcattcagtatgcggtggtgcgcaacgcgcggctgcgttggcctgtttccgagcaa
attctggcgctgagcgaccgaccggtacgcagcgtacaacgccgcgccaagtatctgctg
attgaactggaccacggctggattatcgtccatttggggatgtccggcagcctgcgtatg
ctggctgaggaaaccgaagccggtaagcacgaccatgttgatctggtgatcagcaacggc
atgacgctgcgttataccgatccccgccgttttggcgcctggctgtggtgcgaagacctg
gcgaacagcaatgtgctggcccaccttgggccggaaccgctaagtgaagcctttactggc
gcctacctgtacgaaaaatcgcgcaataagcgcacgctgatcaaaccctggctgatggat
aacaaactggtcgtaggggttggcaatatctacgccagcgaatcactgttcaccgccggg
atcctgcccgaccgcccggccgcttcgctgagcaaaacggaagctgagttgctggtggag
actatcaaggcggtattgctacgctcgattgagcaagggggtaccacactgcgcgatttc
ctgcagtcggacggtaaaccaggctatttcgcgcaagaattgcaggtgtatggtcgtgcg
ggtgagccttgccgcgcgtgcggcacgccgattgaatccgctaaacacgggcagcgcagt
accttcttctgccgtcgctgccaacgctga
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