Salinibacter ruber M8: SRM_00297
Help
Entry
SRM_00297 CDS
T01209
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
srm
Salinibacter ruber M8
Pathway
srm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
srm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SRM_00297 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srm03019
]
SRM_00297 (groL)
03110 Chaperones and folding catalysts [BR:
srm03110
]
SRM_00297 (groL)
03029 Mitochondrial biogenesis [BR:
srm03029
]
SRM_00297 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
srm04147
]
SRM_00297 (groL)
Enzymes [BR:
srm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SRM_00297 (groL)
Messenger RNA biogenesis [BR:
srm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SRM_00297 (groL)
Chaperones and folding catalysts [BR:
srm03110
]
Heat shock proteins
HSP60 / Chaperonin
SRM_00297 (groL)
Mitochondrial biogenesis [BR:
srm03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SRM_00297 (groL)
Exosome [BR:
srm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SRM_00297 (groL)
Exosomal proteins of other body fluids (saliva and urine)
SRM_00297 (groL)
Exosomal proteins of breast cancer cells
SRM_00297 (groL)
Exosomal proteins of colorectal cancer cells
SRM_00297 (groL)
Exosomal proteins of bladder cancer cells
SRM_00297 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
cwf21
Helic-prim_T7_N
Motif
Other DBs
NCBI-ProteinID:
CBH23218
UniProt:
D5H5B3
LinkDB
All DBs
Position
355732..357450
Genome browser
AA seq
572 aa
AA seq
DB search
MSKNPPDLSGGEVKAKQIRFDSDARSALQEGVDQMAKAVKVTLGPKGRNVVLEKSFGAPT
ITKDGVTVAKEIELEERLPNIGAQVLKEAASKTNDDAGDGTTTATVLAQSVINAGLKSVT
SGANPMDVKRGIATAAEHVVEHLRNQSDPVEGKDRISQVATISANNDDSVGSLIADAFER
VGQDGVITVEEARGIETYLDVVEGMQFDRGYLSPYFVTDSEEMEAVLEDAYILIYDDEVG
NMQDLLPILEKVSQTSNPLLIIAEDVEGEALATLVVNKMRGTLKVSAVKAPGFGDRQQSM
LEDIAVLTGGTVISEEKGYRLENATLDYLGQADRVTITEDDTTIVGGEGSEEEIEARVNQ
IRQQIANSTSDYDQEKLQERLAKLAGGVAVLNVGAATEPEMKAQKALVEDALSATRAAVD
EGVLPGGGVAYLRALESIEEVEVENEDQEIGVSIVREALEAPLRQIAENTGHEGSIVVQK
VKDGEGDFGFNARTEEYGDLLDQGVLDPTKVTRSALENAASVGGMLLTTESVVADLESEE
EDDDGGGGGAGGGMPAGGAGGMGGMGGMGGMM
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaagaatcccccggatttatccgggggagaagtcaaggcgaagcaaataaggttt
gactctgatgcacgaagcgccctccaggagggcgtggaccagatggcgaaggccgtcaag
gtcacgctcggcccgaaggggcggaacgtcgtgcttgagaaatcctttggcgccccgacg
atcacgaaggacggcgtcacagtcgcaaaagaaattgaattggaggagcgccttcccaac
atcggcgctcaggtgctgaaggaggccgcgtcgaagaccaacgacgacgccggcgacggc
acgacgacggcgaccgtgctggcccagtctgtcatcaacgccggcctgaagagcgtcacg
tccggcgccaacccgatggacgtgaagcgcggcattgcaaccgccgccgagcacgtggtg
gagcacctccgcaaccagagcgacccggtcgagggcaaggaccgcatctcgcaggtcgcc
acgatctcggccaacaatgacgattcggtcggctccctcatcgccgacgcgtttgagcgt
gttgggcaggacggtgtgatcaccgtcgaggaggcccgcggcatcgagacgtacctcgac
gtggtcgagggcatgcagttcgaccgcggctacctctccccctacttcgtgaccgactcc
gaggagatggaggcggtgctggaggatgcctacattctcatctacgacgacgaggtcggc
aacatgcaggacctgctgccgatcctcgagaaggtcagccagaccagcaacccgctgctg
atcatcgccgaggacgtggagggggaggccctcgccacgctcgtggtgaacaagatgcgc
ggcacgctgaaggtctccgccgtgaaggcgcccggattcggcgaccgccagcagtcgatg
ctcgaggacatcgccgtcctcaccggcggcacggtcatcagcgaggagaagggctaccgc
ctcgagaacgccacgctcgactacctcgggcaggccgaccgcgtcaccatcaccgaggac
gacacgacgattgttggcggcgaaggctcggaggaggagatcgaggcccgggtcaaccag
atccggcagcagatcgccaactccacctccgactacgaccaggagaagctgcaggagcgc
ctcgcgaagctcgccggcggcgtggcggtgctgaacgtgggcgccgcgaccgagccggag
atgaaggcccagaaggcgctggtggaggatgcgctcagcgcgacccgcgcggccgtcgac
gaaggcgtgcttccgggcggcggcgtggcttacctccgcgcccttgagtccatcgaagag
gtcgaggtcgagaacgaggaccaggagatcggcgtctcgatcgtgcgggaggccctggag
gccccgctgcgccagatcgccgagaacaccggccatgaaggctcgatcgtcgtccagaag
gtgaaggacggcgagggcgactttggcttcaacgcccgcaccgaggagtacggggatctt
ctcgatcagggcgtgctcgacccgacgaaggtcacgcgctctgcgctggagaacgccgcg
tccgtgggcggcatgctgctgaccaccgaatcggtcgtcgctgaccttgagtccgaagag
gaggatgacgacggtggtggcggcggtgccggcggcggaatgcctgctggcggtgccggc
ggcatgggcggcatgggtggcatgggtggcatgatgtaa
DBGET
integrated database retrieval system
