Salinibacter ruber M8: SRM_00580
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Entry
SRM_00580 CDS
T01209
Symbol
holA
Name
(GenBank) DNA polymerase III delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
srm
Salinibacter ruber M8
Pathway
srm03030
DNA replication
srm03430
Mismatch repair
srm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SRM_00580 (holA)
03430 Mismatch repair
SRM_00580 (holA)
03440 Homologous recombination
SRM_00580 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srm03032
]
SRM_00580 (holA)
03400 DNA repair and recombination proteins [BR:
srm03400
]
SRM_00580 (holA)
Enzymes [BR:
srm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SRM_00580 (holA)
DNA replication proteins [BR:
srm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SRM_00580 (holA)
DNA repair and recombination proteins [BR:
srm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SRM_00580 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
HP_1247_M
Motif
Other DBs
NCBI-ProteinID:
CBH23501
LinkDB
All DBs
Position
713551..714594
Genome browser
AA seq
347 aa
AA seq
DB search
MAKDTGPAYDDLATAFRHQNFEPLYFFFGEETFLIDELQELLIDEALDPSQHDFNLDVVY
GSETEASEVIGLCQGFPAGAPKRVVVVREFEKLENNRQFKDYAAQPNPQSIVLLACTSKP
NLSAHPYRALKEHATWSEFESPYDNEMPGWIQDYVQGQGYEIKPKAVQMLADYVGTDLQR
AASEIEKLITFAGDATRLTADDVLAASGQTREFNVFELQSALGEGRPADAQRIVDRILQQ
ASNPRSEAIMMVAVLNGYFDKLWKLQKPGALRENKYDLAGYIGVSPYFVEEYKHAAQRYD
RSAIADAYSALVAADYELKGGASREASLVMTLLLRRLLPPDARPVAA
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagacacgggcccggcctacgacgatctggccacggccttccggcaccaaaac
ttcgagcccctctactttttctttggagaggagaccttcctgatcgacgagctgcaggag
ctgctcatcgacgaggcgctcgacccgagccagcacgacttcaacctcgacgtggtgtac
gggtcggagacggaggcttcagaggtgattgggctgtgccagggctttccggcgggggcg
ccgaagcgggtcgtggtggtccgcgagttcgagaagctcgagaacaaccgtcagttcaag
gactacgccgcccagcccaatccgcagtccatcgtcctgctcgcctgcacaagcaagcca
aacctgagcgcccatccgtatcgcgcgctgaaggagcacgccacgtggtccgagttcgag
tcgccgtacgacaacgagatgccgggctggattcaggactacgtgcagggccaggggtac
gagatcaagccgaaggccgtccagatgctcgccgattacgtgggcaccgacctgcagcgg
gcggcgagcgagatcgagaagctcatcacgtttgccggcgacgccacgcggctcacggcc
gacgacgtgcttgccgccagcggccagacgcgcgagttcaacgtctttgagctgcagagc
gccctgggggaggggcgtcccgccgacgcacagcgtatcgtcgaccgcattctgcagcag
gcgtccaacccgcgcagcgaggccatcatgatggtggccgtgctcaacggctatttcgac
aagctctggaagttgcagaagcccggggccctgcgcgagaacaagtacgaccttgccggc
tacattggggtcagcccctatttcgtagaggagtacaagcacgccgcccagcgctacgac
cgctcggcgattgccgacgcctactcggccctcgtggcggcggactacgagctcaagggc
ggggcgtcccgcgaggcctcgctcgtgatgacgctcctgttgcggcggctgctcccgccg
gatgcccgtccggtggcggcgtag
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