Salinibacter ruber M8: SRM_00644
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Entry
SRM_00644 CDS
T01209
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
srm
Salinibacter ruber M8
Pathway
srm00470
D-Amino acid metabolism
srm00550
Peptidoglycan biosynthesis
srm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
srm00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SRM_00644 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SRM_00644 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
srm01011
]
SRM_00644 (murD)
Enzymes [BR:
srm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
SRM_00644 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
srm01011
]
Precursor biosynthesis
Amino acid ligase
SRM_00644 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD_N
MurD-like_N
NBD_C
TMP-TENI
Motif
Other DBs
NCBI-ProteinID:
CBH23565
UniProt:
D5H6B0
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All DBs
Position
779041..780486
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AA seq
481 aa
AA seq
DB search
MTNPALRRGAEPILQSPSSSAMTPDEVHKTRATVVGGARSGRAAARLLAKVGGEVFLTEQ
DAPSDGAAAALDEAGVEYEFGGHTAEALNADVLVLSPGVPTQSNIVQQALRAGLDVYSEI
EAASWFCDAPIVAITGTNGKTTTTSLTGHVFRTAFADTPGREAIVAGNIGYPFSDYVLET
EPTDVVVLEVSSFQLDHVETFRPRVSVLLNITPDHLGRYDHDFEAYAQAKHNIFRNQGEG
DVVVYNRDDDDVRDAVEEAAAEQGVRPMAITREGVPAAGAGFRDGRIVLRTDDEDDSLMP
QDELALRGRHNMYNSLAAAVSARVMEVENDVIRESLSGFEGVPHRLEEVRTVDDVLYVND
SKATNVNAVWYALESFDRPIVLIAGGRDKGNDYTDLKPLVRDQVRAVVALGESTEKVERE
LGGEAPDHSRAATMEDALTQAQRAAQPGDVVLLSPACSSFDMYENYEERGDTFRRLAETL
L
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaccccgcgctgcggcgtggggccgaaccgatcctccaatccccctcatcttct
gcaatgacaccggacgaagtccacaagacacgagccaccgtggtgggcggcgcccgcagt
gggcgcgccgcggcccggctgctggcgaaggtggggggcgaggtgtttctcaccgagcag
gacgccccgtcggacggggccgcggcggccctcgacgaggccggcgtcgagtacgagttt
ggggggcacacggccgaggccctcaacgccgatgttcttgtgctcagtcccggggtgccc
acgcagtcgaacatcgtgcagcaggcgctgcgggcgggactcgacgtgtactccgaaatt
gaggcggcgtcctggttctgcgacgcgcccatcgtggccatcaccggtaccaacggcaag
acgaccacgacgagcctcaccgggcacgttttccgaacggcattcgcggacaccccgggc
cgggaggccatcgtggccggcaacatcgggtacccgttttccgactacgtgctcgagacg
gagccgacagacgtggtggtgctggaggtgtccagcttccagctcgaccacgtggagacg
ttccgcccgcgtgtgagcgtgctgctgaacatcacgcccgatcacctggggcgctacgac
cacgacttcgaggcctacgcgcaggccaagcacaacattttccgcaatcagggcgagggc
gacgtggtggtctacaatcgggacgatgacgacgtacgggacgccgtggaggaggcggcc
gcggagcagggcgtccgcccgatggccatcaccagagagggggtgccggcggccggggcc
ggattccgggacggccgcatcgtgcttcgaaccgacgacgaagacgattcgcttatgcct
caggacgagctcgcccttcgagggcgccacaacatgtacaactcgcttgcggccgccgtc
tcggcccgtgtgatggaggtcgagaacgacgtcattcgcgagagcctgtccggcttcgag
ggcgtgccgcaccggctggaggaggtgcgcacggtggacgacgtgctgtacgtcaacgac
tcgaaggccaccaacgtgaacgcggtctggtacgccctggagagcttcgaccggcccatc
gtcctgattgccgggggccgagacaagggaaacgactacacggacctcaagccgctcgtt
cgcgaccaggtgcgggcggtggtggccctcggggagagtaccgagaaagtggagcgggag
cttggcggagaagcccccgaccacagccgagcggcgacgatggaggacgccctgacccag
gcccagcgcgcggcccagccgggcgacgtggtgctgctgagcccggcgtgctcctccttc
gacatgtacgagaactacgaggagcggggcgacaccttccgccgcctcgcggagacgctg
ctatag
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