Salinibacter ruber M8: SRM_00863
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Entry
SRM_00863 CDS
T01209
Symbol
sbcD
Name
(GenBank) Exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
srm
Salinibacter ruber M8
Brite
KEGG Orthology (KO) [BR:
srm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srm03400
]
SRM_00863 (sbcD)
DNA repair and recombination proteins [BR:
srm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SRM_00863 (sbcD)
Archaeal homologous recombinant proteins
SRM_00863 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
CBH23784
UniProt:
D5H6X9
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All DBs
Position
990208..991569
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AA seq
453 aa
AA seq
DB search
MFERLAGPAPLAPSFPTRSLDVVTLLHTADIHLGFKTHGRRDPDTGLNTRLLDVRRSLEA
VVQRALDADVDAFLFCGDAYHTADPTPTQQDIFVQCLRPLADADIPVVLIVGNHDHPVTF
GRASSLDIFDHIAGAVHCYRKPASSVQVLDTKSGPLQLIPLPWPIRSQILAKDEYRRMSP
DELRQFVEEHYVTYVQRRAAEIMEEETGITPEGTEHALSPDVPTVLAGHVTVQGAALSGS
EHTTMIASEPKFTVGQLAVRPIDYVALGHVHRPQNRNEEGHPPVVYSGSIERVTFNEADE
DKGVQLVDIDPARDPVTHTTFVETPARPFVAISVDARDADAPTERVLAAIQERDVADAIV
RVRYRVREEQVAQVDPERLREALAAADTVAGIERTVDPADRKRRTAVTRESGLEEAVRQY
VGQHDELSGLEEDLVEAALALEAGLEADEANPG
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgaacgattggcgggtcctgctcctctcgctccttccttcccaacccggtcgctc
gacgtcgtgacgctgctccacaccgcggacatccacctgggattcaaaacacacggacgc
cgcgatccggacacgggcctgaacacgcggctcctcgacgtgcggcgctcgttggaggcc
gtggtccagcgtgccctcgacgccgacgtggacgcgtttctgttctgtggggacgcctac
cataccgccgaccccacccccacgcaacaggacatttttgtccagtgcctccggcccctc
gccgacgcggacattccggtcgtgctgatcgtgggcaatcacgaccaccccgtcacgttc
ggccgcgcctcgtcgctcgacattttcgaccacatcgccggcgcggtgcattgctaccgc
aagccggcgtctagcgtccaggtcctcgacacgaaaagcgggccgcttcaactcatcccg
ctgccctggcccatccggagccaaatccttgcaaaggacgagtaccgccgcatgtcgccg
gatgagcttcggcagttcgtggaggagcactacgtgacctacgtccagcgccgggccgcc
gagatcatggaggaggagacgggcatcacgcccgagggcaccgagcatgccctgtcgccc
gacgtgcccaccgtgctggcgggacacgtgaccgtgcagggggccgccctgtccggctcg
gagcacaccactatgatcgcgtcggagccgaagtttaccgtggggcagcttgccgtgcgt
cccatcgactacgtggccctgggccacgtgcaccggccgcagaaccgcaacgaggagggc
catccccccgtcgtgtattccggcagcatcgagcgcgtgacgttcaacgaggccgatgag
gacaagggggttcagctggtggacatcgacccggcgcgcgacccggttacccacaccacc
tttgtcgagacgccggcccgcccgttcgtggcgatttcggtcgacgcccgggacgcggac
gccccgaccgaacgggtgctggcggcgatccaggagcgcgatgtcgccgacgccatcgtg
cgggtccggtaccgggtgcgggaggagcaggtggcgcaggtcgaccccgaacggctccgg
gaggcccttgcggccgccgacacggtcgccgggatcgaacgcacggtggacccggccgac
cgcaagcgccggacggccgtcacgcgcgagtccggactcgaggaggcggtgcgccagtac
gtggggcagcatgacgagctgtccggacttgaggaggacctcgtggaggcggccctggcg
ctcgaggcggggctggaggccgacgaggcgaaccctgggtga
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