Salinibacter ruber M8: SRM_01143
Help
Entry
SRM_01143 CDS
T01209
Symbol
polC
Name
(GenBank) DNA polymerase III polC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
srm
Salinibacter ruber M8
Pathway
srm03030
DNA replication
srm03430
Mismatch repair
srm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SRM_01143 (polC)
03430 Mismatch repair
SRM_01143 (polC)
03440 Homologous recombination
SRM_01143 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srm03032
]
SRM_01143 (polC)
03400 DNA repair and recombination proteins [BR:
srm03400
]
SRM_01143 (polC)
Enzymes [BR:
srm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SRM_01143 (polC)
DNA replication proteins [BR:
srm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SRM_01143 (polC)
DNA repair and recombination proteins [BR:
srm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SRM_01143 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
CBH24064
UniProt:
D5H7Q9
LinkDB
All DBs
Position
complement(1313649..1314425)
Genome browser
AA seq
258 aa
AA seq
DB search
MSNPSSPPLVLHLERPLVFFDLEATGTDPQAARIIQIGMQRFVPSEDGAALDETIDVLVD
PEEEIPAAVTDLTGLSPDAVRQAPPLGAHLDRIAPLLADADLAGYNALAYDIPLLQAEFE
RHGRTLPGPDDRVVLDPYRLEQVLRPRTLSALYERYTGDALDDAHDALSDVEAAGRVLQR
QLADHDIDGTPADLAQQIRGDYLDDQRRLKQDGDAVVVCFGKHDGKTLRDIQRDHPGYFD
WMYETIDDLRPHIDEALE
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgaatccatcgtcgcccccgcttgtgctccacctcgaacgccccctcgtcttcttc
gaccttgaagccaccggcacggacccccaagcggcccgcatcatccagatcgggatgcag
cggttcgtgccgagcgaggacggggccgcgctagacgagaccatcgatgtgctcgtcgat
ccggaagaggagattccggcggccgtcacggacctgacgggactctcgcccgacgccgtc
cggcaggcgcccccgctaggggcccacctcgaccgcatcgcaccccttctcgccgacgcc
gacctggccggctacaacgccctcgcgtacgacatccccctcctccaggccgaatttgaa
cggcacgggcggacgcttccgggccccgacgaccgcgtcgtcctcgacccgtaccgcctg
gagcaggtgctgcgtccgcgcaccctctcggccctgtacgagcggtacaccggcgacgcg
ctcgacgacgcccacgacgccctcagcgacgtggaggcggccgggcgggtcctgcagcgc
caactggccgaccacgacatcgacggcacgccggccgacctggcccaacagattcggggc
gactatctcgacgaccagcgccgcctcaagcaggacggcgacgcggtggtggtgtgcttc
ggcaagcacgacgggaagaccctccgcgacatccagcgcgaccaccccggctacttcgac
tggatgtacgaaaccatcgacgacctccgcccccacatcgacgaggccctggagtga
DBGET
integrated database retrieval system
