Salinibacter ruber M8: SRM_01280
Help
Entry
SRM_01280 CDS
T01209
Symbol
phrB
Name
(GenBank) Deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
srm
Salinibacter ruber M8
Brite
KEGG Orthology (KO) [BR:
srm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srm03400
]
SRM_01280 (phrB)
Enzymes [BR:
srm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SRM_01280 (phrB)
DNA repair and recombination proteins [BR:
srm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SRM_01280 (phrB)
Prokaryotic type
SRM_01280 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
CBH24201
UniProt:
D5H846
LinkDB
All DBs
Position
1448968..1450452
Genome browser
AA seq
494 aa
AA seq
DB search
MSNRIVLGAARLLLPEFCLRRRTPSDARPGTVPDRSLFLFRRDLRLADNTGLARACRASD
EVVPAFIFDPRQCDPDNNAFFSEHAFAFLVRSLKELRRRLRERGGRLFVFEGDPAAILSE
LISAGDISAVHVNRDYTPFARRRDDQLRSVCREEGARFQSSNALLLTEPEEVQPSGGGAY
HTFTPFRRRAQSVSTPPPRGKVEGPFCDRALSVETTPLETYDRYPTDDLRAKGGRAEGIE
FLEEIETLGAYRDARHQPAKESLTALSAHHKFGTISIRESLYVVKKAFEDYHKLISQFYW
RDFYTHLLFHRPEQLTTSLRPIGRHIPWRNERGEFDRWHEGATGVPFVDAGMRELRETGY
MHNRVRMVVASFLTKDLLVDWRWGAQHFARTLTDYDPAVNAGNWQWAASVGTDYRLRIYN
PYSQAEKHDPEAEYIKRWVPEVRDVDADRLASGTQEDFSDAAPGYPAPIVDRNDAYHRAK
DAFREAGRALEEAQ
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
ttgtccaatcgcatcgttttgggggccgcccggctactgctccccgagttctgccttcgt
cgtcgcacgccctcagacgcccggcccggtacagtgccagaccgcagtcttttccttttc
cgccgggaccttcgactggccgacaatacagggctggcccgggcgtgccgggcgtcggac
gaggtcgttccggcgttcatctttgacccccgacagtgcgaccccgacaacaacgccttc
ttcagcgagcacgcgttcgcctttctggtccgctcgctgaaagaactccggcggcgtttg
cgggagcgaggggggcggcttttcgtcttcgagggcgacccggccgccattctttccgag
ctcatctctgccggggacatctcggcggtccacgtcaacagggactacacgccgttcgcc
cggcgccgggacgaccagctgcgctcggtgtgccgcgaggaaggggctcggtttcagtcg
tcaaacgcgcttctcctgaccgagcccgaggaggtccagcccagtgggggaggcgcctac
cacaccttcaccccgtttcggcggcgcgcccaatccgtgtccacgccccctccgagaggc
aaggtggaggggccgttctgcgaccgcgcactctcggtcgagacgactccgttggagacg
tacgaccgctaccccaccgacgaccttcgggcgaagggcggacgggcggagggaattgag
ttcctcgaggagatcgagacgctgggggcctaccgggacgcccgccaccagccggcgaaa
gagtcactgacggccctctcggcgcaccacaagtttggcaccatttcgatccgggagtcc
ctctatgtggtgaagaaggcgttcgaggactaccacaagctgatcagccagttctactgg
cgggacttctatacccacctcctcttccatcgccccgagcagttgaccacctcgctgcgc
ccgatcggccggcacatcccttggcgcaacgagcggggcgagttcgaccggtggcacgag
ggggccacaggcgtgcccttcgtcgatgccggcatgcgcgagctccgcgaaaccggctac
atgcacaaccgggtgcgaatggtcgtcgccagctttctcacgaaagacctgctcgtggac
tggcgctggggcgcacagcattttgcgcggacgctcaccgactacgaccccgccgtgaac
gccggcaactggcagtgggccgcctcggtgggcaccgactaccggctccgcatctacaac
ccctactcccaggccgagaagcacgatccggaggccgagtacatcaagcgctgggtgccg
gaggtgcgggacgtcgatgccgaccggctcgcctccggaacgcaagaggacttttcggat
gcggcccccggctatccggctccgatcgtggaccgaaacgacgcctaccatcgtgcaaaa
gacgcgtttcgggaggccggtcgcgcactggaagaagcccagtga
DBGET
integrated database retrieval system
