Salinibacter ruber M8: SRM_01397
Help
Entry
SRM_01397 CDS
T01209
Symbol
fadD
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
srm
Salinibacter ruber M8
Pathway
srm00061
Fatty acid biosynthesis
srm00071
Fatty acid degradation
srm01100
Metabolic pathways
srm01212
Fatty acid metabolism
srm02024
Quorum sensing
Module
srm_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
srm00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SRM_01397 (fadD)
00071 Fatty acid degradation
SRM_01397 (fadD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SRM_01397 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
srm01004
]
SRM_01397 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
srm04147
]
SRM_01397 (fadD)
Enzymes [BR:
srm01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SRM_01397 (fadD)
Lipid biosynthesis proteins [BR:
srm01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
SRM_01397 (fadD)
Exosome [BR:
srm04147
]
Exosomal proteins
Exosomal proteins of breast milk
SRM_01397 (fadD)
Exosomal proteins of breast cancer cells
SRM_01397 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Motif
Other DBs
NCBI-ProteinID:
CBH24318
UniProt:
D5H8G3
LinkDB
All DBs
Position
1582213..1584111
Genome browser
AA seq
632 aa
AA seq
DB search
MSGPIHTAPPDAGPCVRGRTIPDLLYEATDAYDNPQALNQPTDEGWVPMSLDQFRRRAEA
TALGLRALGLEQGTKVALLLESDVHYCVVDMGCLIGGLIDVPLYLSSAAEQMQYVVDHAE
AEALVVSNPKRLGQAAALLPDLPRIETVIVCDPGDEDARPDLPDRVTLKTLEAVQALGRA
EVEDPSAAVDDLRAEIDPQDLATIIYTSGTTGRPKGVMLSHENISSNAITSIAEIDDFET
GPEGEVVISFLPLTHVFARMLQYAYMMRGISIYFAHPDDLVDALPKVRPTVFASVPRVLE
KVYAGIKKKVMGMQGLQKRIGEWGLQVAQDYDMTRSQPPLYALKRAAADRLVFRKWRAAF
GGRVKYVVVGGAALQPDLANILAAADITTLQGYGLTETSPVISYTRPQRNKPGTVGEPLP
GVEVKIAEDGEILTRGPHVMQGYYKAPDETDAVMEENGWLHTGDIGEFDEDGFLKITDRK
KALFKLSTGKYVMPQPIENRMGSDPLVDNAVVVGRDRKFCAALLFPAPDQAQALASERGL
GAERDIEDLLTEPDIVDAYRSIVQSANEGMEPWSTVKRLALIPDELTVDSDLMTPTMKIR
RPEVRTAYTDEIEALYDEDGAEGGRGGVLVEV
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgtccggtcccattcacacggcgcccccagatgctggtccctgcgtgcgggggcggacc
atccctgatctgctgtacgaggccaccgacgcgtacgacaacccccaggccctgaaccag
ccgaccgacgagggctgggtgcccatgtcgctcgatcaatttcggcggcgggcggaagcg
acggccctgggcctgcgtgccctcggcctggagcaggggacgaaggtggccctcctcctg
gagagcgacgtgcactactgtgttgtcgacatggggtgcctgatcgggggcctcatcgac
gtgccgctgtacctgtcgagcgcagcggagcagatgcagtacgtcgtcgaccacgccgag
gcagaggccctcgtcgtctccaacccgaagcgcctcgggcaagccgcggccctgctcccg
gacctgccccgcatcgagacggtcatcgtctgcgaccccggcgacgaggacgcccgcccg
gacctgccggaccgggtgacgctaaagacgctggaggccgttcaggccctcggccgcgcc
gaggtcgaggacccgtccgcggccgtcgacgacctgcgggcggaaatcgacccccaggac
ctcgcgaccatcatctatacgagtggcaccacggggcggcccaagggcgtgatgctgtcc
cacgagaacatctcgtcgaacgccattacgtcgatcgcggagatcgacgacttcgagacc
gggccggaaggggaggtggtgatctcgttcctgcccctcacgcatgtgttcgcccgcatg
ctgcagtacgcctacatgatgcggggcatcagcatctacttcgcccaccccgacgacctc
gtggacgccctgccgaaggtgcgaccgacggtcttcgcgtcggtcccgcgcgtcctcgaa
aaggtgtacgccggcatcaagaagaaagtgatgggcatgcaggggcttcagaagcgcatc
ggggagtgggggctccaggtggcgcaggactacgacatgacccggtcgcagccgcccctc
tacgccctcaagcgcgcagcggcggaccggctcgtgtttcgcaagtggcgagctgccttt
gggggccgggtcaaatacgtggtcgtaggaggggcggcccttcagccggacctcgccaac
atcctggcggcggcggacatcacgacgcttcagggatacggcctgaccgagacgagcccg
gtgatctcctacacccgcccccagcgcaacaagcccggcacggtgggcgagcccctgccc
ggtgtagaggtcaaaattgcggaggacggagaaatcctaacgcggggcccccacgtaatg
cagggctactacaaggcccccgacgagacggacgccgtcatggaagagaacggatggctc
cacaccggagacatcggcgagttcgacgaagacggctttctcaaaatcaccgaccgcaag
aaggccctcttcaaactctcgaccggaaagtacgtgatgccccagcccatcgagaaccga
atgggaagtgacccgctggtggacaacgccgtcgtcgtgggccgggaccgcaagttctgt
gcggccctgctgtttccggccccggaccaggcgcaggcgctggcgtccgaacggggcctg
ggcgccgagcgagacattgaagatctcctgactgagcccgacattgtggatgcgtaccgg
tcgatcgtgcagagcgcgaacgaagggatggagccctggtcgaccgtcaagcgcctggcc
ctcatccccgacgaactgaccgtggactcggacctgatgaccccgaccatgaagatccgc
cggccggaggtgcggacggcctacaccgacgagattgaggccctgtacgacgaagacgga
gcggagggcggacgggggggggttctcgtggaggtgtga
DBGET
integrated database retrieval system
