Salinibacter ruber M8: SRM_01447
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Entry
SRM_01447 CDS
T01209
Symbol
gadB
Name
(GenBank) L-2,4-diaminobutyrate decarboxylase
KO
K01593
aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:
4.1.1.28
4.1.1.105
]
Organism
srm
Salinibacter ruber M8
Pathway
srm00350
Tyrosine metabolism
srm00360
Phenylalanine metabolism
srm00380
Tryptophan metabolism
srm01100
Metabolic pathways
srm01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
srm00001
]
09100 Metabolism
09105 Amino acid metabolism
00350 Tyrosine metabolism
SRM_01447 (gadB)
00360 Phenylalanine metabolism
SRM_01447 (gadB)
00380 Tryptophan metabolism
SRM_01447 (gadB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
srm04147
]
SRM_01447 (gadB)
Enzymes [BR:
srm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.28 aromatic-L-amino-acid decarboxylase
SRM_01447 (gadB)
4.1.1.105 L-tryptophan decarboxylase
SRM_01447 (gadB)
Exosome [BR:
srm04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SRM_01447 (gadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Beta_elim_lyase
Aminotran_1_2
Aminotran_5
SepSecS
Motif
Other DBs
NCBI-ProteinID:
CBH24368
UniProt:
D5H8L3
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All DBs
Position
1643998..1645590
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AA seq
530 aa
AA seq
DB search
MKKSRALVCTCQMSVVAEGEHPSPRFQGFAQLAFRGSVSHLLSLSLFTRAVPMDHDRLEL
SPEKMRTLGYRVVDLLVDHFADGGDESLGEAPSRDELEAHLREDLPEEGTPPEAVLDQVE
AEVLPNTMRVDHPRFFGFVPGPNNFVGVLADMLASGFNVFSGTWISGAAAAQIELVVIDW
LRTLCGLPEAAGGLFTSGGSMANVTALAAARHARLDDDVTGAVAYCSDQTHTSVDRALRL
LGFGPDQLHRVPADDQYRLDPESLEEAIAADRAAGRRPFCIIANAGTTNTGAVDPLPALA
ALADAEDLWLHVDGAYGAPTVVCERGQNRLDGIERVDSLTLDPHKWLFQPFEIGGVLVRD
EQHLRRAFRLEAEYLEDAVGEEDEVNFSASGIQLTRSFRALKLWMTLKVFGREHVATAVA
RGFERAEQAERLLRGRPGWTVVTPAQMGIITFRCEPDGWTPDQVDALTRRLIAAVNDEGA
AFLTQTTLDGRPVLRLCPINPRTTAKDLEETIARLDALQAEMEVGATPAS
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
gtgaagaaatccagggcgcttgtttgcacgtgccagatgagcgtggtcgctgagggcgaa
catccatcccccaggttccagggcttcgcgcaactcgcgttccggggctccgtttcccac
ctgctttcgctttcattgtttacgcgtgctgtgcccatggatcacgaccgcctcgaactc
tcccccgaaaaaatgcggacgctcggctaccgggtcgtggatctcctggtggaccacttc
gcggacggaggggacgaatcgctgggggaggcgccgtcgcgagacgaactagaggctcac
ctccgggaagacctcccggaagaggggacccccccggaggccgttcttgatcaggtggag
gcggaggtgctgccgaacacaatgcgggtggaccaccctcgcttcttcgggttcgtgccg
gggccgaacaacttcgtcggcgtgctcgccgacatgctggcgtcggggttcaatgtgttc
tcggggacctggatctcgggcgccgccgccgcgcagatcgaactggtggtgatcgactgg
ctgcggacgctctgtggcctcccagaggccgcaggggggctgttcacgagcgggggctcg
atggcaaacgtcacggccctggccgccgcccgccacgcccggctggacgacgacgtgacg
ggggccgtcgcctactgctccgaccagacccacacgtcggtcgaccgggccctgcggctg
ctcgggttcggccccgaccagctccaccgggtgcccgccgacgatcagtaccggctcgat
cctgagtccctggaagaggccatcgcggccgaccgggcggcggggcggcgtcccttctgc
atcatcgccaacgcgggcaccaccaacaccggggccgtcgatccgctgcccgccctggcg
gccctggccgacgccgaagacctgtggctgcacgtggacggggcctacggggcgccgacg
gtcgtctgcgaacggggccagaaccggctcgacggcatcgaacgggtcgattcgctgacc
ctggatccgcacaagtggctcttccagcccttcgagattggaggtgtgctcgtgcgcgat
gagcagcacctccgccgggcctttcggctggaggcggagtacctggaggacgcggtgggg
gaggaggacgaggtcaacttctcggcctccggcatccagcttacgcgcagcttccgggcg
ctcaagctctggatgacgctcaaggtgtttggccgcgagcacgtcgccaccgcggtggcg
cggggcttcgagcgggccgagcaggccgagcggctgcttcgggggcggcccgggtggacg
gtggtgaccccggcccagatgggcatcatcacgtttcgctgcgaaccggacgggtggacg
cccgaccaggtggacgcgctcacgcgccgcctcattgcggccgtgaacgatgaaggggcg
gccttcctgacgcagacgacgctcgacggccggcccgtcctccggctgtgccccatcaac
ccacggacgacggcgaaggacctcgaagaaacgattgcacggctcgacgccctccaggcc
gaaatggaggtgggggcaaccccggcatcctga
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