Salinibacter ruber M8: SRM_01607
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Entry
SRM_01607 CDS
T01209
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
srm
Salinibacter ruber M8
Pathway
srm00300
Lysine biosynthesis
srm00470
D-Amino acid metabolism
srm01100
Metabolic pathways
srm01110
Biosynthesis of secondary metabolites
srm01120
Microbial metabolism in diverse environments
srm01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
srm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SRM_01607 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SRM_01607 (dapF)
Enzymes [BR:
srm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
SRM_01607 (dapF)
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Gene cluster
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
CBH24528
UniProt:
D5H923
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All DBs
Position
1833608..1834465
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AA seq
285 aa
AA seq
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MIETRSRMVSFTKMQGTGNDFVVLDNRSAQLSPDELSACAAAWCPRRYGVGADGLLALDA
PKTSAADYRMHYVNADGSRATMCGNGARCLFRFARRAGFQNDPLAFDTDAGLYRATTVPE
DNPSGVRLFVPDVTEVRADVALDRSVPQAVRRLCFAHAGTEHLVAVVDDLDAVPVQKWGR
RLRRDPSLAPAGANVNFVELGGEDGLRLRTYEKGVEAETPSCGTGVLAAAETAGRLTGAD
PETTLRVRTPGGKLAVGRAEGGTLYLQGPAVSVFDGRVERPGDER
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgatcgagacgcgcagccgaatggtttcgtttaccaagatgcaggggacggggaacgac
tttgtcgtcctcgacaaccgatccgctcagctcagtccggacgagctgtcggcctgtgcg
gccgcctggtgcccgcgccgctacggagtgggggcggacgggcttctggccctcgacgcc
ccgaagacgtcggcggccgactaccgcatgcactacgtgaatgccgacggatcacgcgcg
accatgtgtggaaacggcgcacgatgcctctttcggttcgcccgacgggccggatttcag
aacgatccgctggcgttcgacaccgacgcgggactgtaccgggccaccacggtgccggaa
gacaatccgtcgggggtgcgcctcttcgtgccggacgtcacggaggtccgggcggacgta
gcgctcgaccgatcggtgccccaggccgttcggcgcctctgcttcgcccatgcgggcacc
gagcaccttgtggccgtggtcgacgacctcgatgccgtgccggttcagaagtggggacgc
cgcctccgtcgcgatcccagcctggcccccgccggggccaacgtcaacttcgtggagctc
ggaggcgaggacggcctccgactccgcacctacgaaaagggcgtggaggccgagacgccg
tcctgtggcaccggggtgctggccgcggcggagaccgccggccgcctcacgggagccgat
cccgagacgaccctgcgggtgcgtacgccgggtggtaagctcgccgtgggccgggccgaa
gggggaaccttgtatcttcagggcccggccgtatcggtgtttgatggacgcgtcgagcgc
ccgggagacgagcggtag
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