Salinibacter ruber M8: SRM_01742
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Entry
SRM_01742 CDS
T01209
Symbol
alaS
Name
(GenBank) Alanyl-tRNA synthetase, class IIc
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
srm
Salinibacter ruber M8
Pathway
srm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
srm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SRM_01742 (alaS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
srm01007
]
SRM_01742 (alaS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
srm03016
]
SRM_01742 (alaS)
Enzymes [BR:
srm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
SRM_01742 (alaS)
Amino acid related enzymes [BR:
srm01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
SRM_01742 (alaS)
Transfer RNA biogenesis [BR:
srm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SRM_01742 (alaS)
Prokaryotic type
SRM_01742 (alaS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
tRNA_SAD
DHHA1
CmlA_N
Motif
Other DBs
NCBI-ProteinID:
CBH24663
UniProt:
D5H9F8
LinkDB
All DBs
Position
complement(1986541..1989441)
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AA seq
966 aa
AA seq
DB search
MSHDPMNPHLQSSADPSRSSEEIRQDFLQFFQAKGHEVVSSASLVPEGDGTLLFTNAGMN
QFKDVFLGTGQRPYSRAVDTQKCLRVSGKHNDLEEVGHDTYHHTFFEMLGNWSFGDYFKA
EAIRWAWELLVERWGLAPDRLYATVHEGDDDFGLSADAEAYDLWLSETPLPEERVLYEPS
KENFWMMGDTGPCGPCSELHVDLRPPEARQETPGRELVNIDHPQVMELWNLVFIQYNAQT
DGSLEPLDDQHVDTGMGFERMVAVLQGKESTYDTDLFAPLLQAMADRSPREEIRGYDDLH
IEDDDEHEQVRIALRVVADHIRAIAFAISDGVMPSNEGRGYVIRRILRRAVRYGYQTLEL
EEPFLHRLVDPLIEKMGGPFDGLAEQQEFIEQAIRSEEESFLETLGTGIEFFERVVPHVT
GFQDTDGEESDRLLGALREDAQAMDLLEKAYVDTDDENDILHSFARTARGGTLPGQIAFL
LHDTYGFPIDLTRLMARERDLDVDMEGYETLMDRQQERARAASDFAVDQSDVQAWQSVSP
GEASVFVGYDRAVVPDAEVRAVRVVETGDTQQYEVELSRTPFYAEAGGQVGDTGTLRFGD
ESVQVLDTQREGERIAHTVDTLPEPLDGPVEAAVDAERRNHIRTHHTATHLMHAVLRETL
GDHVQQKGSLVAPDRLRFDFSHFDAVDEDTLRHIERRVNTAIQQNIPKQEARDVPIDEAL
DRGATALFDEQYGDRVRVITFDPDFSMELCGGTHVDATGEIGLFRFLSEGSVASGVRRVE
AVAGKAALEHVESELETLTRARRQFRSLHTSLPEAIAEVQEERDRLAGEVDQLRRGQLSD
QLDTFIAENAASVDGITVVTGRLDRASMDDLQELGQQFRDKLGQGAVGVLGSVGEDGEKA
YVVATVADDLVDDGALRAGDLVGTLGDRLGGGGGGRPSLASAGGRDPEALDTVLDGVPAL
VRDRLE
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgtcccacgacccgatgaatccgcaccttcagtcgtccgccgacccgtcccgctcctcc
gaagaaatccgccaggactttctgcagttctttcaggcgaagggccacgaggtcgtttcc
agtgcgtcccttgtgccggagggagacggcactctgctcttcacaaatgccgggatgaac
cagttcaaggacgtgttcctcgggaccggtcagcggccgtactcccgggccgtcgacacg
cagaagtgcctgcgggtctccggcaagcacaacgacctggaggaggtggggcacgacacg
taccaccacaccttcttcgagatgttgggcaactggagcttcggcgactacttcaaggcc
gaggccatccggtgggcgtgggagctcctcgtggagcgatggggcctggcgccggaccga
ctgtacgccacggtgcacgagggcgacgatgactttggcctgtcggccgacgcggaggcg
tacgacctgtggctttcggagacgcccctcccggaagagcgggtcctctacgaaccgtcc
aaggaaaacttctggatgatgggcgacactggcccctgcggtccgtgctcggaacttcac
gtggacctccgcccccccgaggcccgacaagagacgccggggcgggagctggtgaacatc
gaccacccgcaggtgatggagctgtggaatctcgtctttatccagtacaacgcacagacc
gacggcagcctggagccgctcgacgaccagcacgtggatacggggatgggctttgagcgg
atggtggccgtgcttcagggcaaggagtcgacgtacgacacggacctcttcgcgccgctc
ctgcaggcgatggccgaccgttccccgcgcgaggagattcggggctacgacgatctgcac
atcgaagacgatgacgagcacgagcaggtgcgaattgccctccgcgtggtggccgatcac
atccgcgccatcgccttcgccatctccgacggcgtcatgccgagcaacgaggggcgggga
tacgtcatccgccgcatcctgcgccgcgccgtccgctacggctaccagaccctcgagctg
gaggagccgttcctgcaccgcctcgtcgacccgctgattgagaaaatgggcggcccgttc
gacgggctcgccgagcagcaggagtttatcgagcaggcgatccggtccgaggaggagagc
ttcctggagaccctgggcacgggcatcgaattcttcgagcgcgtggtgccccacgtcact
ggtttccaagacacggacggggaggagagcgatcgtcttctcggcgcgcttcgagaggac
gcccaggcgatggatctgctggagaaggcgtacgtcgacaccgacgacgagaacgacatc
ctgcacagctttgcccgtacggcccgcggggggacgctgccgggacagatcgcgtttctc
ctccacgacacgtacggattcccgattgacctcacgcggctcatggcccgcgagcgcgac
ctggacgtggacatggaggggtacgaaacgctaatggaccggcagcaggagcgtgcacgc
gccgcctccgactttgcggtcgatcagagcgacgtacaggcctggcagtcggtgtcgccg
ggagaggcgtctgtcttcgtcgggtacgatcgggccgtcgtccctgacgccgaggtgcgt
gcggtgcgggtggtggagaccggtgacacacagcagtacgaggtcgagctgagccgcacg
cccttttacgccgaggcggggggacaggtcggggataccggcacgcttcgatttggggac
gagtcggtgcaggtgctcgacacccagcgcgagggcgagcgcatcgcgcacacggtggac
accctgccggagcctctggacggaccggtggaggcggcagtagatgcggagcgccgcaat
cacattcgtacccaccacacggccactcacctgatgcacgccgtcctgcgcgagacactg
ggggatcacgtgcagcagaaagggtcgctcgtggccccggaccgactccgattcgacttt
agccacttcgatgcggtcgacgaggataccctgcgtcacatcgagcgtcgggtgaacacc
gcgatccaacaaaacatcccgaagcaggaggcgcgcgacgtgcccatcgacgaggcgctg
gaccgcggcgcgacggccctgttcgacgagcagtacggggaccgggtgcgcgtcatcacc
ttcgacccggacttctccatggagttgtgcggggggacccacgtcgacgccaccggtgag
attgggctcttccgctttctgtctgagggatcggtggcgtcgggcgtgcgtcgcgtggag
gccgtggccgggaaggcggcgctggagcacgtggagtctgagctggagacgctgacgcgg
gcgcgtcggcagtttcggtcgctgcatacgtccctgccggaggccatcgcggaggtgcag
gaggagcgcgaccgcctggcgggcgaggtcgaccagctgcgccgcggccagctctcggac
cagttggacacctttatcgccgagaacgcagcctcagtggacgggatcacggtggtcacc
ggccggctcgaccgggcaagcatggacgacctacaggaactgggccagcagttccgcgac
aagctggggcagggggctgttggggttctcggcagtgtgggggaggacggagagaaggcg
tacgtggtggccacggtggccgatgacctcgtcgacgacggggcgttgcgggccggagat
ctcgtcgggacgctgggcgaccggctcggtggcggcggcggcgggcgcccgtccctggcg
tcggccggcgggcgcgaccctgaggccctcgacacggtgctggatggcgtcccggccctc
gtccgcgatcgcttggagtag
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