Salinibacter ruber M8: SRM_01836
Help
Entry
SRM_01836 CDS
T01209
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
srm
Salinibacter ruber M8
Pathway
srm03030
DNA replication
srm03410
Base excision repair
srm03420
Nucleotide excision repair
srm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SRM_01836 (polA)
03410 Base excision repair
SRM_01836 (polA)
03420 Nucleotide excision repair
SRM_01836 (polA)
03440 Homologous recombination
SRM_01836 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srm03032
]
SRM_01836 (polA)
03400 DNA repair and recombination proteins [BR:
srm03400
]
SRM_01836 (polA)
Enzymes [BR:
srm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SRM_01836 (polA)
DNA replication proteins [BR:
srm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SRM_01836 (polA)
DNA repair and recombination proteins [BR:
srm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SRM_01836 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SRM_01836 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
HHH_5
PTS_IIB
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
CBH24757
UniProt:
D5H9Q2
LinkDB
All DBs
Position
complement(2094769..2097618)
Genome browser
AA seq
949 aa
AA seq
DB search
MAASQRDGPALLHRFSRQPAPPRMSPPDAAPDDNALYLIDAMSLAYRAHYIFISRPLINS
KGQNTSAAYGFTNSLLKLIEDHDIEHAAVVFDEGEEDTFRKEMYDDYKANRDPPPEELLE
NIPYIKEIVEGLDIPVLEVPGVEADDVIGALAKQAEADDADVVIVSPDKDFKQLLSDKVS
IYKPAKGDQDFEIKTRDTFRDEYGLDPAQFVDMLALMGDSSDNVPGVYGIGEKTAQKLLR
EYHSVENLIDHADDLSGKRAREGMQEHAEEARLSKRLVRIRTELDVGLDWHELQRRELDE
EKLTAVFQELEFDSFGDRLGIEGGEGSEEETDEDDPDLQFDFGPYEKVQELDPEAVDYEV
VRTEEELHAFADRLGEEARYAFDAEATSRDPMTADLVGLSFSSEAERATYVPTPLPDDTP
TDAVLDVLGPVLARDTEKLGHNLKYDLLLLKQHGVEVGGTLFDTMVAHYLVAPEENHNLD
DVARSVLNYKMVPIADLIGDETDRDSMREVDVETAAPYACEDADISYRLADELEAQLEDG
NVLDVAHDIEFPLVHVLATMEHTGIRLDTDVLDEILAGLEERLSGIEEEVFELAGEEFNI
NSTQQLGEILFEKLDLPVVSKTPTGKPSTKESVLQELSTEHEIPGLVLDWRSTYKLKSTY
LDSLGELVHPETGRLHTSFNQTRTATGRLSSSDPNLQNIPIRTEMGRQIRRAFVPKDGWA
LLSADYAQIELRILAAMSGDDAMRATFQEGGDIHTDAAARVYGIDPEDVTPEQRSKAKEV
NYGIPYGISPWGLAQRMRMPVDEAQDIIKQYRKSYPGVSQLLNELVEKAQDKGYAETLLG
RRRYLPDIDSSNSNARSAAERVAVNMPIQGTQADMIKIAMNRIHDRLAGDDWATQMLLQV
HDELVFEVPPDELDAAQTMIDDEMRDALPLDDVPVTVDMDTGDNWLEAH
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
ttggccgcatcgcagcgtgacggcccggccctgttgcatcgtttctcccgccagcccgcc
ccgcctcgcatgtctccccctgacgccgcccccgatgacaatgccctgtacctcatcgac
gcgatgtcgttggcctatcgggcgcactacatcttcatcagtcggcccctgatcaactcc
aagggccagaatacctccgcggcgtacgggttcacgaactccctcctcaagttgatcgag
gaccacgacatcgagcacgccgcggtggtgttcgacgagggcgaagaggacacctttcgg
aaggagatgtacgacgactacaaggccaaccgggacccgccgccggaggagctgctggaa
aacattccctacatcaaagagatcgtagaggggctcgacattccggtgctggaggtgccg
ggcgtggaggccgacgacgtcattggggcgctcgcgaagcaggccgaggcggacgacgcc
gacgtggtgatcgtctcgcccgacaaggacttcaagcagctcctcagcgacaaggtctcg
atctacaagcccgccaagggggatcaggactttgaaatcaagaccagagacacttttcgg
gacgagtatggcctggacccggcccagttcgtcgatatgctggccctgatgggcgacagc
agcgacaacgtgccgggcgtgtacggcatcggggagaagaccgcccagaagctcctgcgg
gagtaccactccgtggaaaacctgatcgaccacgccgacgacctgagcggcaagcgggcc
cgggagggcatgcaggagcacgccgaggaggcgcgtctcagcaaacggctcgtccgcatc
cgcaccgaactggacgtgggcctcgactggcacgagctccagcggcgcgagctggacgag
gagaagcttacggccgtcttccaggagctggagttcgactccttcggcgaccgcctcggc
atcgaggggggcgaggggtccgaagaggagacggacgaggacgacccggacctgcagttc
gacttcggcccctacgagaaggtgcaggagctcgacccggaggccgtcgattacgaggtc
gtccggacggaggaggagctccacgcctttgccgaccggctcggcgaggaggcccgctac
gcgttcgacgcggaggcgacctcccgagacccgatgacggcggacctcgtgggcctgtcg
ttcagctccgaggcggagagggccacctacgtcccgaccccgcttcccgacgacaccccg
accgacgcggtcctcgacgtgctggggccggtgctggcgcgggacaccgagaagctgggg
cacaatctgaagtacgatctgctcctgttgaagcagcacggcgtcgaggtgggcgggacg
ctgttcgatacgatggtggcccactacctcgtggccccggaggaaaatcacaacctggac
gacgtggcgcggtcggtgctcaactacaagatggtccccattgcggacctgattggggac
gagaccgaccgggactcgatgcgggaggtggacgtggagacggccgccccctacgcctgc
gaggacgccgacatttcgtaccgcctggcggacgagctggaggcgcaactggaggacgga
aatgtgctcgacgtggcccacgacatcgagtttccgctcgtgcacgtgctcgccacgatg
gagcacaccggcattcggctcgacacggacgtgctcgacgaaatcctggccgggctggag
gagcgcctcagcggcatcgaggaggaggtgttcgagttggccggagaggagttcaacatc
aactcgacccagcagctcggcgaaattctgttcgagaagctcgaccttccggtcgtctcc
aagacgccgaccgggaagccgtccaccaaggagagtgtgcttcaggagctctccaccgag
cacgaaattccggggctcgtcctggactggcggtcgacctacaagctcaagagcacctac
ctcgacagcctcggcgagctcgtccaccccgagacggggcgcctgcacaccagcttcaat
cagacccgcacggccaccgggcggctctcgtcgagcgacccgaacctccaaaacattccc
atccgcaccgagatgggccggcaaatccggcgcgccttcgtcccgaaggacggatgggcc
ctgctctcggccgactacgcgcagatcgagctgcgcatcctcgccgccatgagcggggac
gacgccatgcgggcgacctttcaggaggggggcgacatccacaccgacgccgccgcgcgg
gtctacggcatcgaccccgaagacgtgacgccggagcagcgcagcaaggcgaaggaggtc
aactacggcattccgtacggcatctcgccgtgggggctcgcccagcggatgcggatgccg
gtcgacgaggcgcaggacatcatcaagcagtaccggaagtcgtaccccggggtctcgcag
ctcctgaacgagctggtggagaaggcccaggacaagggctacgcggagacgctcctgggg
cgccggcgctacctccccgacatcgacagctcgaacagcaacgcgcgcagcgctgccgag
cgggtggccgtcaacatgcccattcagggcacgcaggcggacatgattaagattgcgatg
aaccgcatccacgaccggctcgccggcgacgactgggcgacgcagatgctgctgcaggtg
cacgatgaactcgtgtttgaggtgcccccggacgagctggacgccgcacagaccatgatc
gacgacgagatgcgcgacgccctgccgctcgacgatgtgcccgtaaccgtcgacatggac
accggcgacaactggctcgaagcccactga
DBGET
integrated database retrieval system
