Salinibacter ruber M8: SRM_01967
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Entry
SRM_01967 CDS
T01209
Symbol
phrB
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
srm
Salinibacter ruber M8
Brite
KEGG Orthology (KO) [BR:
srm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srm03400
]
SRM_01967 (phrB)
Enzymes [BR:
srm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SRM_01967 (phrB)
DNA repair and recombination proteins [BR:
srm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SRM_01967 (phrB)
Prokaryotic type
SRM_01967 (phrB)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
CBH24888
UniProt:
D5HA33
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All DBs
Position
complement(2241757..2243145)
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AA seq
462 aa
AA seq
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MSLLPDRIQPLNDKGVQEGARYVLYWMEQSQRAQHNPALERALHHASETGLPLLVVCGVT
DDFPEATLRHHTFLLEGLQETKQRLADRGLKLVVREGAPDDVALAYAGAAAVLVTDRGYL
RHQRQWRARVAEEAPCRVEQVEGDVVVPVETVTDKAEYAARTIRPKMHEHLERCLQLPEP
VPVETPSLDLDIDSGRSLDDIEAVTDQMDLDRGVGAVSDLYPGGVSEAEAILDDFLAEHL
DGYDENRNQIHSHAVSHMSKYLHYGQISPVWLAQQVRRAEGPESDIESYIEELVVRRELT
MNHVHFRPDTYDSYTCLPEWARESLAEHADDEREYVYSLDELEGGTTHDPYWNAAMKEMR
ETGYMHNYMRMYWGKKILEWSPDPKTAYDRTLRLNNRYFLDGRDPNSFANVAWVFGLHDR
GWKERPVYGKVRYMSQGGLDRKADPDAYVEKVDRLATVAQSA
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgagccttcttcctgaccgcatccagccgctaaacgacaagggtgttcaggagggcgcc
cggtacgttctgtactggatggagcagtcgcagcgggcccagcacaatcccgccctggaa
cgggccctccaccatgccagcgagacgggcctgcccctgctggttgtgtgcggcgtcacg
gacgattttccggaggcgacccttcggcaccacacctttctgctggagggcctccaagaa
acaaaacaacgcctcgccgaccgcgggctcaagctggtcgtgcgtgaaggggcgccggac
gacgtggcgctcgcgtacgccggggcggccgcggtcctggtcaccgaccgcgggtatctc
cgtcaccaaaggcagtggcgggcccgcgtggcggaggaggccccctgtcgggtggagcag
gtggagggcgacgtggtggtgccggtcgagacggtcaccgacaaggcggagtacgccgcc
cggaccatccggccgaagatgcacgagcacctggagcggtgtctacagctgccggagccg
gtgcccgtggagaccccctccctcgacctggacatcgattcaggacgctcgctcgacgac
atcgaggccgtcacggaccagatggatctcgaccggggcgtgggggcggtttccgatctg
tatccgggcggcgtttccgaggccgaggccatcctggacgatttcctcgcggagcatctg
gacgggtacgacgagaaccgcaaccaaatccactcccacgcggtctcgcacatgagcaag
tacctccactacgggcaaatctcgcccgtgtggctggcccagcaggtgcgccgggccgag
ggcccggagtcggacatcgaatcctacatcgaagagctcgtggttcggcgcgagctgacg
atgaaccacgtccacttccggcccgacacctacgactcgtacacgtgcctgccggagtgg
gcccgcgaaagcctggccgaacacgccgacgacgagcgtgagtacgtctacagcctggac
gagctggaaggagggaccacccacgacccgtactggaacgcggcaatgaaagaaatgcgg
gagaccggctacatgcacaactacatgcgcatgtactggggcaagaagattttggaatgg
tcccccgacccgaagacggcctacgaccgcacgcttcggctcaataaccggtacttcctc
gacggacgcgatcccaactccttcgccaacgtggcgtgggtattcgggcttcacgaccgc
ggctggaaggaacggcccgtgtacggaaaggtgcggtacatgagccagggcggcctggat
cggaaggccgatccggacgcctatgttgagaaggtagaccgtcttgcgacggtcgcgcaa
tctgcgtag
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