Salinibacter ruber M8: SRM_02076
Help
Entry
SRM_02076 CDS
T01209
Symbol
sbcC
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
srm
Salinibacter ruber M8
Brite
KEGG Orthology (KO) [BR:
srm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srm03400
]
SRM_02076 (sbcC)
DNA repair and recombination proteins [BR:
srm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SRM_02076 (sbcC)
Archaeal homologous recombinant proteins
SRM_02076 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
SMC_N
AAA_29
Rad50_zn_hook
RPW8
AAA_21
Zn-ribbon_8
Prefoldin_2
Motif
Other DBs
NCBI-ProteinID:
CBH24997
UniProt:
D5HAE2
LinkDB
All DBs
Position
complement(2386952..2390011)
Genome browser
AA seq
1019 aa
AA seq
DB search
MVPVRLELKNFLSYGTEAPPLEFDHFDVACLSGGNGEGKSALLDAMTWAVWGAARKSSGR
RKPDEELIRIGTRHMRVAFTFDLEDTRYRVVRSFSRSETGKTTSSDLEFQLRDAAGEGYR
PLTGATQRETQARIEDTLGLDYDTFINSAFLLQGRSDEFTQKRPSQRKEILTRILNLGRY
EALEDEARDHWREAKERQQRAAAEVERLEAALEDVPDWEAERAAVQADIKAQTEALSDLR
DREKALTQKRANLEATAREAESIRESMASLDDRIEEHRDEIEALTARIEEAEALLEDRTA
IEEAYDEHQSLVAERDALEDTRERHRTLRQKLDDMSSSLQERRNDVERRLERLRAERAGI
EESLDDCRETLAQRAEVETRLRRAQAARQQVPERKRVRRRRDRLEQRKAEAREAIVGARQ
QLRGEIETLRAQIEEEAEALERREQIEARIDALRSKQETRAALDERMAEIEDDGTARSQA
VQEQAGQLEALRDEREREVEELRRFREADGDVCPTCGTELTDAHREEAEATLRSHIDELD
TAIESARAQLDEEKERRAELRRTYRQLQDKREALDDVGEALATAQEQKRALEETAEALAA
HREKAERLDQRLTEGRYAESARRQWQACKQRLAETEVDAEAFEALQNRAAQFDRYADRLG
EIERAAARREELAQKRDERDEKIEQLRTALDENRVAEDVQEDMEDLQAKIDALEFDPDRF
QEIRERLQALSDVPDRHNALVNAQENRTEWTEQRARIQERIEDAEGEKKELEERLAECES
ALEDKPEVVAEQEDVSEQVEAEEETLTDLQQRLGKLDAQLEQAAADQEALEAAREERQDA
AADRQRYKHLRAAFGKNGIPSLIIEETLPDIEERANRILDRLTDGRMHVRLDTLKEKKSG
GTKETLEIIITDEHGAPRPYETYSGGESFRVNFALRVALAQLLAERSGVRVRTLVIDEGF
GTQDEAGIERLVEAIQAIREDFAKILVITHLERLKRAFPVRIEVEKDPSVGSTFELVGA
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggtcccggtccgcttggaactgaaaaacttcctgagctacggcacggaggccccaccc
ctcgagttcgatcacttcgacgtggcctgcctgtccggcggcaatggagagggcaagtcg
gccctcctcgacgcaatgacgtgggccgtctggggggcggcgcgcaagtcgagcggccgt
cgcaagccggacgaagagctcatccgaattgggacccggcacatgcgggtggcgtttacc
ttcgaccttgaggacacgcgctaccgggtggtccgctccttctctcgatcggagacgggc
aagaccacgtcgtccgacctcgagttccagctccgcgacgccgccggcgagggctaccgc
cccctcacgggggcgacccagcgcgagacgcaggcccggatcgaggacacgctggggctg
gactacgacacgttcatcaactcggcctttttgctgcagggccgctccgacgagtttacg
cagaagcggcccagccagcgcaaggagatcctcacccgcatcctcaaccttggccggtac
gaggcgctcgaagacgaggcgcgcgaccactggcgcgaagcgaaggagcggcagcagcgc
gccgcggcggaggtggagcgcctggaggccgccctggaggacgtgccggactgggaggcg
gagcgggcggcggtgcaggcggacatcaaggcgcagacggaggccctctccgacctccgt
gaccgggagaaggcgctgacccagaagcgggccaatttggaggcaacggcccgggaggcc
gagtcgattcgcgagtcgatggccagcctggacgaccggatcgaggagcaccgcgacgag
atcgaggccctgacggcgcgcatcgaggaggccgaggcgctcctggaggaccgcacggcc
atcgaggaggcgtacgacgaacatcagtccctcgtcgcggagcgggacgccctcgaagac
acgcgcgaacgccaccggacccttagacagaagttggacgacatgtcgtcgtcccttcag
gagcggcgcaacgacgtcgagcgtcgcctggagcgactgagggccgagcgggccgggatc
gaagagtcgctggacgactgccgggagaccctcgcgcagcgggcggaggtggagacgcgc
ctgcggcgcgcccaggcggcccggcagcaggtgccggagcggaagcgggtgcgccggcgt
cgggatcggctggagcagcggaaggccgaggcgcgggaggccatcgtgggggcacggcag
cagcttcggggcgagattgagaccctccgggcccaaatcgaagaggaggcggaggcgctg
gaacggagggagcagatcgaggcacggatcgatgcgcttcgctcgaagcaggagacgcgg
gcggccctggacgagcgcatggccgagatcgaagacgacgggacggcccggtcccaggcc
gtccaggagcaggcggggcagctggaggcgctgcgggacgaacgcgagcgggaggtcgag
gagttgcggcggtttcgagaggccgatggggacgtgtgcccgacctgtggcaccgagctg
accgacgcccaccgggaggaggcggaggccacgctccggtcccacatcgatgagctcgac
acggccatcgagtcggcccgggcacaactcgatgaagaaaaagagcgacgggccgaactg
cggcggacctaccgtcagcttcaggacaaacgcgaggcgctggacgacgtcggggaggcc
ctcgcgacggcccaggagcagaagcgggcgctggaggagacggcggaggcgcttgcggcc
caccgcgaaaaggccgaacgccttgatcagcgcctcacggaggggcgctacgccgagtcc
gcgcggcggcagtggcaggcctgcaagcagcgcctcgcggagacggaggtcgacgcggaa
gccttcgaggcgctgcagaaccgggcggcccaattcgaccggtacgcggatcggctgggc
gagattgagcgcgcagccgcacgacgggaggagctggcgcagaaacgggatgagcgggac
gagaagatcgagcagctccggacggctttggacgagaaccgtgtggccgaggacgtacaa
gaagacatggaggatctgcaggcgaagatcgacgccctggagttcgacccggaccgcttt
caggaaatccgagagcgcctgcaggcgttgagcgacgtgccggaccgccacaacgcgctc
gtcaacgctcaggaaaaccgcaccgagtggacggagcagcgggcgcggattcaggagcga
attgaggacgcggagggggagaagaaggaactggaagagcgcctcgcggagtgcgagtcg
gcactggaggacaagccggaggtggtcgccgagcaggaggacgtgtcggagcaggtagag
gccgaagaagagacgctcaccgacctgcagcagcgcctcggcaagctggacgcgcaactg
gagcaggccgcggcggaccaggaggccttggaggcggcccgagaagagcgccaagacgcc
gccgccgaccgccagcggtacaagcacctccgggccgcctttgggaagaacggcatcccg
tcgctcatcatcgaagagacgcttcccgacatcgaggagcgcgcaaaccgcatcctggat
cggctcaccgacggccggatgcacgtgcggctcgacaccctcaaagagaagaaaagcgga
ggcaccaaagaaacgctcgaaatcatcatcaccgacgagcacggcgcaccccgcccctac
gagacgtactcgggcggcgagagcttccgggtcaactttgccctccgcgtcgcgctggcg
caactgctggccgagcgcagcggcgtacgggtgcgcaccctcgtgatcgacgaggggttc
ggcacgcaggacgaagccggcatcgagcggctcgtggaggccattcaggcgatccgcgag
gacttcgctaagatcctcgtcatcacgcacctcgaacggctcaagcgggcctttccggtg
cgcattgaggtcgagaaagatccctccgtcggctccaccttcgagctcgtcggggcgtag
DBGET
integrated database retrieval system
