Salinibacter ruber M8: SRM_02554
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Entry
SRM_02554 CDS
T01209
Symbol
phrB
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
srm
Salinibacter ruber M8
Brite
KEGG Orthology (KO) [BR:
srm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srm03400
]
SRM_02554 (phrB)
Enzymes [BR:
srm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SRM_02554 (phrB)
DNA repair and recombination proteins [BR:
srm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SRM_02554 (phrB)
Prokaryotic type
SRM_02554 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
CBH25475
UniProt:
D5HBS0
LinkDB
All DBs
Position
complement(2982602..2984215)
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AA seq
537 aa
AA seq
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MGPAPHDVRGRPPTDLAEWEEFWGIGGGREQYISCTQIDAFAPPMPPRTQIVWYKRDLRV
GDHRPLAEAADRGPVLPLYVAEPSIAAGADYHPRHWTLIREALIELRARLAKRGQPLIVR
CGEMPEVLESLRATAGPLRLWAHEETGNQRTHERDQRVRDWARAHEVPFTEVPSRGVVRG
PHDRDEWADRWKASMDRPLVHPPDALQPVDSVAPGPMPSHADLGLRPSTAALQQIGEAEA
HRTLDSFLRERGRNYRRAMSRPGPAQTECSRISVHLAYGTISLRRVVYELRRRQEELRGA
NGPDAAARRKALSSFDSRLHWHSHFTQKLEDAPRIENESYIPAFDALRADDWDPALYDAW
LHGRTGFPMVDACMRHLRATGWLNFRMRAMLCSFAAYDCWLDWRRFAPTYGGLMADYVPG
IHYPQVQMQSGTTGINRVRIYNPVKQGKEQDPDGTFIRRWVPELSHLDTTAYVHAPWKMS
PIEQQAAGCVIGKDYPERVVDHNDAYHHAQDAIHELRQRPEIQAQADTVLERHGSRA
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
gtgggccccgccccgcacgatgtccgtggacgaccgccgacagatcttgcagaatgggaa
gagttttggggaatcggagggggacgagagcagtatatcagctgcactcaaatcgacgct
ttcgccccgcccatgccgccgcgcacgcaaatcgtctggtacaaaagagacctgcgggtg
ggcgaccatcgcccccttgcggaggccgccgatcggggaccggtgctgcccctctacgtg
gcggagccgtccatcgcggcgggggcggactatcatccgcgccactggacgctgattcgg
gaggcgctcattgaactgcgggcccgcctcgcgaagcggggacagcccctgatcgtgcgc
tgcggcgaaatgccggaggtcctcgagtcgctgcgggcgaccgccgggccccttcgtctc
tgggcccacgaagaaaccggcaaccagcgcacccacgagcgggaccagcgcgtccgtgac
tgggcccgcgcccacgaggtcccgtttacggaggtgccaagccgaggcgtggtgcgcggg
ccgcacgaccgggacgagtgggccgaccggtggaaggcgtccatggaccggccgctcgtg
cacccgcccgacgcgctccagccggtcgactccgtagcgcccgggccgatgccgtcccac
gccgacctggggctccggccgtcgaccgccgcccttcagcagattggggaggcggaggcc
caccgtactctcgactcgttccttcgcgaacgaggacgcaactaccgccgggccatgtcg
cgccccggtcccgcgcagacggagtgctcgcggatctcggtgcacctggcctacggcacg
atcagcctccggcgggtggtttacgagctgcgacggcggcaggaagagcttcgcggagcg
aacggcccggacgcggcggcccgacgcaaggcgctgagcagcttcgacagccgcctgcac
tggcacagccactttacgcagaagctggaggacgcgccccggatcgaaaacgagagctac
atccccgctttcgatgcccttcgcgccgacgactgggacccggcgctctacgacgcgtgg
ctccacggccgcacggggttccccatggttgacgcctgcatgcggcacctgcgggccacg
ggctggctcaacttccgcatgcgggcgatgctctgctcgtttgcggcctacgactgctgg
ctcgactggcgccgcttcgcgcccacctacggcggcctcatggccgactacgtgccgggg
atccactacccgcaggtgcagatgcagtccggcacgaccggcatcaaccgcgtgcgcatc
tacaacccggtaaagcagggcaaggagcaggaccccgacggcacgttcatccggcgctgg
gtccccgagctgtcgcacctcgacacgaccgcgtacgtccacgccccctggaagatgtcg
cccatcgagcagcaggccgccggctgcgtgatcggcaaagactacccggagcgcgtcgta
gaccacaacgacgcgtaccaccatgcccaagacgccatccacgagctgcggcagcgtccg
gagatccaagcgcaggccgacacggtcctggaacggcacggcagccgggcctga
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