Salinibacter ruber M8: SRM_02599
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Entry
SRM_02599 CDS
T01209
Symbol
fadD
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
srm
Salinibacter ruber M8
Pathway
srm00061
Fatty acid biosynthesis
srm00071
Fatty acid degradation
srm01100
Metabolic pathways
srm01212
Fatty acid metabolism
srm02024
Quorum sensing
srm04146
Peroxisome
Module
srm_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
srm00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SRM_02599 (fadD)
00071 Fatty acid degradation
SRM_02599 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SRM_02599 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
SRM_02599 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
srm01004
]
SRM_02599 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
srm04147
]
SRM_02599 (fadD)
Enzymes [BR:
srm01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SRM_02599 (fadD)
Lipid biosynthesis proteins [BR:
srm01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SRM_02599 (fadD)
Exosome [BR:
srm04147
]
Exosomal proteins
Exosomal proteins of breast milk
SRM_02599 (fadD)
Exosomal proteins of breast cancer cells
SRM_02599 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
CBH25520
UniProt:
D5HBW5
LinkDB
All DBs
Position
complement(3036157..3038055)
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AA seq
632 aa
AA seq
DB search
MPAQVEFDTIPEMVLRLCDRYRGRERPVLRHKVRGDGWQEITWEGFQDRVQALAGYLHRQ
SVREGDRVALLSENRPEWAVSDLGTQLIGAANVSIYTSLPPSKVAHILRDSGAKVCIVSV
PVQRKKIEEIADTCPELEEVIVMSETADDPPVPMTHWDDALAAGREHWSEHEAELTGIAE
SIAPGDTSALIYTSGTTGQPKGVVLTHRNFCSNVKGALRRIPIGEDDHHLSFLPLSHAFE
RTAGHTAVLAAGATISYAESIEAVSQNLQEVQPTLMISVPRMFEKVYKRVTKQAKEGGPL
KQALFDWAVGVGERHAEAQQKTGSGPSLLLRGQRAVAHRLVFSKLHEKLGGNLRFAASGG
AALPEEIGTFFQAAGVTIIEGYGLTETAPVLTINPLDAPRYGTVGHVMPGVTVAIQPLEE
NEPAGAVSGSDYPTSLSTPEGEILVKGPNVMKEYWNQPEETRAAFGPDGWYHTGDVGRFE
EGYLKITDRIKHMIVTEGGKNVYPGPIEETFKTKNWINQIVVVGEGRPFLAALVVPNFDA
LRMRARDEGIDESTCDDAELLHHDAAQALFQDVFTAYNRDAAAHEKIRNFRLLGEPFTVE
EGTLTPTLKLRRSVIRERHADLIDEMYEEFGR
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcacaggtcgaattcgacaccattcccgagatggttctccgcctttgtgatcgg
taccgagggcgggagcggccggtgctgcggcacaaggtccggggcgacgggtggcaggaa
atcacctgggagggcttccaggatcgggtgcaggccctggccggctacctgcatcggcag
agtgtgcgcgagggcgatcgggtcgccctgctgtcggaaaaccgtccggagtgggccgtc
agcgacctggggacgcagctcattggggcggcgaacgtctcgatctacacgtcccttccg
ccctcgaaagtagcccacatcctccgggactccggggccaaagtgtgcatcgtgtccgtg
ccggtccagcgcaagaagatcgaggagattgcggacacgtgccccgagctcgaagaggtg
atcgtgatgagcgagacggcggacgacccgcccgtccccatgacgcactgggacgatgcc
ctggcggcgggccgcgagcactggagcgagcacgaggcggagcttaccggcattgcggag
tcgatcgcgccgggggacaccagcgccctcatctacacgagcggcaccaccggccagccg
aagggggtggtgctaacccaccgcaacttctgctcgaacgtaaagggcgccctgcggcgc
atccccatcggggaggacgatcaccacctttcgttcctgcccctctcgcacgccttcgag
cggacggcgggccacacggccgtgctcgccgccggggccaccatcagctacgcggaaagc
atcgaggcggtcagccaaaacctccaggaggtgcagccgaccctcatgatctcggtgccg
cgcatgttcgagaaggtgtacaagcgcgtgacgaagcaggccaaggagggaggacccctc
aagcaggccctcttcgactgggcggttggggtgggcgaacggcacgctgaggcccagcag
aagaccggctcgggaccgagcctgctgttgcgtgggcagcgggcggtggcccaccgtctg
gtcttttccaaactgcacgagaaactcggtggaaacctccggttcgccgcctccggtggg
gcggcgctgcccgaagagattggcaccttcttccaggccgcgggcgtgaccatcatcgag
ggctacggccttacggagacggcccccgtcctcacgatcaatcccctggacgccccccgc
tacggcaccgtcggccacgtcatgcccggcgtgacggtcgccattcagccgctggaggag
aacgagccggccggggcggtcagtggcagcgactaccccacatccctctccacgccggaa
ggggagattctggtgaagggccccaacgtgatgaaggagtactggaatcaacccgaagag
acacgggcggccttcggcccggacgggtggtatcacaccggcgatgtcggacgcttcgag
gagggctacctcaagattacggaccggatcaagcacatgatcgtcacggagggcggaaag
aacgtctatcccggcccgatcgaggagacgtttaagaccaagaattggatcaaccagatc
gtcgtggtgggggaggggcgtccgtttctcgcggccctggtggtgcccaatttcgacgcc
ctccgcatgcgggcacgagacgaggggattgacgagtccacctgtgacgatgcggagctg
ctgcaccacgacgcggcgcaggccctgtttcaggacgtctttacggcctacaaccgcgac
gcggcggcccacgagaaaattcgcaacttccgcctcctcggcgagccgtttaccgttgag
gaggggacgctcacccctacgctcaagctccgtcgcagcgtcattcgggagcgccacgcg
gacctcatcgacgagatgtacgaagagttcggccggtga
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