Salinibacter ruber M8: SRM_02603
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Entry
SRM_02603 CDS
T01209
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
srm
Salinibacter ruber M8
Pathway
srm00550
Peptidoglycan biosynthesis
srm01100
Metabolic pathways
srm01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
srm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SRM_02603 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SRM_02603 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
srm01011
]
SRM_02603 (mrdA)
Enzymes [BR:
srm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SRM_02603 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
srm01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
SRM_02603 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
CBH25524
UniProt:
D5HBW9
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All DBs
Position
3043689..3045629
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AA seq
646 aa
AA seq
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MDEYRTRVRIYAGVVVFLFFLLGLRLVQLQGFNGASEDGTPPGSAVREQSVEPARGALYA
RDSTLLVDNRPTYTIRITPRYFDASKAPLLANLLGVADSTVRRRLREARERNAFRPTPSF
REVSFDTFSRVQEHLYELPGVSYDVELRRRYHTAARAAHALGYVHEIDEQALSRMPADYR
AGDRIGRTGLEHAYESILRGDRGREMVLVNVHGTEVREYQNGVMDTPPVGGHDLHLTLDH
EVQALAESLFVGKRGAAVALDPDTGGILSLVSTPDFDPSLFARSVSTSAWDSLRSDPSDP
LYNRATQSGYPPGSTWKPFMSLVALETGMLTASERMDCPSSYRIGRRAFKNHNGQDEGRI
TVAKALEVSCNTFFYQVMENMSLATWHDWALKFGFGQEVPLEGFRQEPGLIPDSSYFDQT
YGRWTDGYTINLGIGQGDMSVTPLQMARYAAALGNGGRLPTPHLVRKAVHPETGAARRTE
LPPPDPIPVDPSHFDVVQEGMHRVMTDGTGRWVQIPDIPSAGKTGTAQNPHGEDHSLFIM
FAPYDDPEIALAVVVENAGYGATAAAPIASLMAEQYLTGSIADTWERRYWKRRLREEVRS
APEDGAPSPSTSPSETTPAVQATTQPAAPTPADSSRPSASSPTDRP
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggatgagtatcgcacccgcgtccggatctacgccggggtcgtcgtctttctctttttc
ctgctcggccttcgtctggtgcagctccagggcttcaacggcgcgtccgaggacggcacg
ccgcccggaagcgccgtgcgggagcaatcggtagagccggcacgaggggccctgtacgcc
cgggacagcacgctcctggtggacaaccggcccacctacacgattcggatcacgccccgg
tactttgacgcgtcgaaggctccgctgctggccaacctactgggcgtggccgactcgacg
gtgcgccgccgactgcgggaggcgcgcgagcggaatgccttccgcccgacgccctcgttt
cgggaggtctcgttcgacacgttcagtcgcgtgcaggagcacctctacgaactgcccggc
gtgtcgtacgacgtagagttgaggcggcgctaccacacggccgcccgggcggcccatgcc
ctcggctacgttcacgagattgacgagcaggccctgtcccgcatgcccgcggactaccgg
gccggcgaccgcatcggccgcacgggcctggagcacgcctacgaatcgatccttcggggc
gaccgggggcgcgagatggtgctcgtgaacgtgcacgggacggaggtgcgggagtaccag
aacggcgtcatggacacccctccggtcggcgggcacgatctccacctcacccttgaccac
gaggtacaggccctcgccgagtccctcttcgtggggaagcgcggcgcggccgttgcactc
gaccccgacaccggtggcatcctttccctcgtcagcacgccggacttcgacccctccctg
tttgcccggtcggtcagcacatcggcgtgggacagcctccgctcggacccgagcgatccg
ctctacaaccgcgccacgcagagcggctaccccccaggctccacctggaagccgttcatg
tccctcgtcgccctcgaaaccgggatgctcaccgcctcggagcgcatggactgcccgtcg
agctaccggatcgggcgccgggcgttcaagaaccacaacggacaggacgaagggcgcatc
acggtggcgaaggccctggaagtgtcctgcaacacctttttctaccaggtaatggagaac
atgagcctggccacctggcacgattgggccctgaagttcgggttcggccaggaggtgccg
ctcgaaggattccggcaggagccgggactgattccggactcctcctatttcgaccagacg
tacggccgctggaccgacgggtacaccatcaacctcggcatcggacagggcgacatgtcc
gtcacccccctccagatggcccggtacgcggcggccctcggcaacggcggccgcctcccc
acgccccacctcgtccgcaaggccgtccacccggagaccggggcggcccggcgcaccgag
ctgcctcccccggacccaattccggtcgatccctcccacttcgacgtcgtgcaggagggc
atgcaccgcgtcatgaccgacggcaccggccggtgggttcagattcccgacatccccagc
gccggcaagacgggcacggcccagaacccgcacggcgaggaccactcgctgttcatcatg
tttgcgccgtacgacgacccggagatcgccctcgcggtggtcgtcgagaatgcgggctac
ggggccaccgccgcggcccccattgcgagcctgatggccgaacagtacctgacaggctca
atcgcggacacgtgggagcggcgctactggaagcgacgcctgcgggaggaggtgcgcagc
gccccggaggacggcgcgccctccccctccacgtctccctcggagacaacgcccgccgtc
caggccaccacgcaacccgccgccccgacgcccgctgactcgtcccgccccagtgcctca
tcgccgaccgatcgcccatga
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