Salinibacter ruber M8: SRM_02606
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Entry
SRM_02606 CDS
T01209
Symbol
uvrA
Name
(GenBank) UvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
srm
Salinibacter ruber M8
Pathway
srm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
srm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SRM_02606 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srm03400
]
SRM_02606 (uvrA)
DNA repair and recombination proteins [BR:
srm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SRM_02606 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SRM_02606 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
nSTAND1
AAA_29
DnaJ_CXXCXGXG
AAA_21
AAA_33
RsgA_GTPase
AAA_22
AAA_18
NACHT
PRK
Viral_helicase1
T2SSE
Motif
Other DBs
NCBI-ProteinID:
CBH25527
UniProt:
D5HBX2
LinkDB
All DBs
Position
complement(3048864..3052040)
Genome browser
AA seq
1058 aa
AA seq
DB search
MPSRNTHHAPQVKRGSALGVQHEGPAGRLLRASPSTKLPTPRMPEHITLRGARENNLQAI
DLDIPRNRLVVVTGLSGSGKSSLAFDTIFAEGQRRYMESLSAYARQFLEMMERPEIDYVD
GLSPVISIEQKTVSGNPRSTVGTVTEVYDFLRLLYARAATAYSHETGNRMRQQSDDEIVD
GILDFPEGTRLQILAPVVRGRKGHYRELFEQTSAQGFERFRVDGEMRTYEEDMKLERYAT
HDVEVVIDRLAIKDGIRSRVSQSVETALEMGGGTLIADVVDGPDGVETGDHLFSRDLVDP
ETGLSYEEPSPNMFSFNTPYGACPECEGLGTAKQIAPELVVPHPEKTINEGALAPLGEPR
DIWIFNQLEAVAEAYDFDFDTPIEALSDEQLAVILEGAGEEQFEIEYGYKGREVQYKHRF
DGLYDHIWHTYEETSSSKKRRRAESFMREMDCPACGGGRLKTESLHYRIGGKSIADLAQM
DLTRLRDFVEDVPFDTERQTRIGEPIVKEVRERLDFLIGVGVGYLTLDRPARTLSGGESQ
RIRLATQVGTQLTGVLYVLDEPTIGLHPRDNDRLIESLESLRDLGNSVVVVEHDRDMIEA
ADHVVDLGPGAGIHGGHVITTGPPSVLTVDPVEQTNGTAANGAAEHEIEDNGVARQQVAE
RAADYDSDHYDFESFTAAYLQGERVIPLPDERRDGTGESITLKGATGHNLKGEDVDVPLG
TLICVTGVSGSGKSTLVNQTLFPILHRHHHNAKTVPLPYDRVEGIDHVDKVIEIDQQPIG
RTPRSNAATYTKLMDYLRDLFAQLPEAEIRGYTKSRFSFNTDPGRCDKCGGTGTVTLEMN
FLPDVDVTCDACDGKRYGPETLEVAYKGKNIAEVLDMTVAEAVDFFENQPRLVRTLKTLD
AVGLGYLTLGQSSTTLSGGEAQRVKLSKELSRPGTGDTLYILDEPTTGMHFEDVRHLLNV
LHGLVDEGNTVMVIEHNMDVIKQADHVIDLGPEGGREGGEILFEGRPEALAEADTHTSAY
LREELERTRTAQTDAEKTAPVGESGDGLSSGQPEPTAE
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
ttgccctcacgcaatacgcatcacgcgccccaagtgaaacgaggaagtgcccttggggtg
caacacgagggcccggcagggcgcttgctccgagcatccccctccacgaagttgccgact
ccccgcatgcccgagcacatcaccctccgcggcgcgcgcgagaacaacctccaggccatc
gacctcgacattccccgcaaccggctcgtcgtggtgacgggcctgtcagggtccggcaag
tcgagcctcgcgttcgacacgatctttgccgagggccagcggcgctacatggagagcctg
agcgcctacgcccgccagttcctagagatgatggagcggcccgagatcgactacgtcgac
ggcctctcgccggtcatctccatcgagcagaagaccgtctccggcaacccgcgctccacg
gtcggcaccgtcacggaggtgtacgacttcctgcgcctgctctacgcccgggccgccacc
gcctactcccacgagacgggcaaccgcatgcggcagcagagcgacgacgagatcgtggac
gggatcctcgacttccccgagggcacgcgcctgcagatcctggcgccggtggtgcggggg
cgcaagggccactaccgcgagctcttcgagcagacctccgcgcagggcttcgagcggttt
cgcgtggacggggagatgcggacctacgaggaggacatgaagctggagcgctacgcgaca
cacgacgtggaggtggtcatcgaccgcctcgccatcaaggacggcatccgctcgcgggtg
agccagtccgtcgagacggccctggagatggggggcggcaccctcatcgcggacgtggtc
gacgggcccgacggcgtggagacgggcgaccacctcttcagccgcgacctcgtggacccc
gagacgggcctctcctacgaggagccctcgcccaacatgttttcgttcaacacgccgtac
ggcgcgtgtccggagtgcgaggggctggggaccgccaagcaaattgcgccggagctcgtc
gtcccgcacccggagaaaacgatcaacgagggcgcgctggccccgctcggggagccgcgc
gacatctggatcttcaaccagctggaggcggtcgcggaggcgtacgacttcgacttcgac
acgccgatcgaggccctgagcgacgagcagctggcagtgatcctggagggggccggcgag
gagcagttcgagatcgaatacggctacaagggccgcgaggtgcagtacaagcaccgcttc
gacggcctctacgaccacatctggcacacctacgaagagacgagctcgtcgaagaagcgg
cggcgggccgagtcgttcatgcgcgagatggactgtcccgcctgcggcggcgggcgcctg
aagaccgagagcctacactaccgcatcgggggcaagtcgatcgccgacctggcgcagatg
gacctcacccggctccgcgatttcgtggaggacgtcccgttcgacaccgagcgacagacg
cgcatcggagaaccgatcgtgaaggaggtgcgggagcggctcgacttcctcatcggggtg
ggcgtgggctacctcacgctcgaccgcccggcccgcaccctcagcgggggcgagagccag
cggatccgcctcgccacgcaggtgggcacgcagctgaccggtgtcctttacgtcctcgac
gagccgaccatcggcctgcacccgcgcgacaacgaccgcctcatcgagagcctcgaaagc
ctgcgcgacctcggcaactcggtcgtcgtggtggagcacgaccgcgacatgatcgaggcc
gccgaccacgtggtcgacctcggccccggggccggcatccacgggggacacgtcatcacc
acgggcccgccgtccgtcttaacggtcgatccggtggagcagaccaacggcacggcggcc
aacggcgcggccgagcacgagatcgaagacaacggcgtggcgcggcagcaggtggccgag
cgcgccgcggactacgacagcgaccactacgacttcgagagctttaccgccgcctacctg
cagggcgagcgcgtcatcccgctgcccgacgagcgccgcgacggcaccggcgagtcgatc
acgctgaagggggccacgggccacaacctgaagggggaggacgtggacgttccgctggga
acgctgatctgcgtcaccggggtcagcggctccggcaagtcgaccctcgtcaaccagacg
ctctttccgattctacaccggcaccaccacaacgccaagacggtgccgctgccttacgac
cgcgttgagggcatcgaccacgtcgacaaggtcatcgagatcgaccagcagcccatcggc
cgcacgccgcgctccaacgcggccacctatacgaagctgatggactacctgcgcgacctt
ttcgcccagctgccggaggcagagatccgcggctacaccaagagccgcttcagctttaac
acggacccgggccgctgcgacaagtgcgggggcaccggcacggtcacgctggagatgaac
ttcctgccggacgtggacgtgacctgcgacgcgtgcgatggcaagcgctatgggcccgag
acgctggaggtggcgtataagggcaagaacatcgccgaggtgctggacatgaccgtggcg
gaggcggtcgatttcttcgagaaccagccgcgcctcgtccgcaccctcaagacgctcgac
gcggtggggctcggctacctcaccctcggccagtcgtccaccacgctcagcggcggggag
gcgcagcgcgtgaagctctcgaaggagctctcccgccccggcaccggcgacacgctctac
attctcgacgagccgaccaccggcatgcacttcgaggacgtgcgtcatctcctcaacgtc
ctgcacgggctcgtcgacgagggcaacacggtgatggtcatcgagcacaacatggacgtc
atcaagcaggccgaccacgtgattgacctcggcccggagggcgggcgcgagggcggcgag
atcctgttcgagggccggcccgaggccctggcggaggccgacacgcacacgtcggcctac
ctgcgggaggagttggagcgcacccgaaccgcgcagaccgacgcggagaagacggccccc
gtcggcgaatcgggcgacggcctctcgtcgggacagccggagccgacggcggagtga
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