Salinibacter ruber M8: SRM_02885
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Entry
SRM_02885 CDS
T01209
Symbol
ruvC
Name
(GenBank) Crossover junction endodeoxyribonuclease RuvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
srm
Salinibacter ruber M8
Pathway
srm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SRM_02885 (ruvC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srm03400
]
SRM_02885 (ruvC)
Enzymes [BR:
srm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
SRM_02885 (ruvC)
DNA repair and recombination proteins [BR:
srm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SRM_02885 (ruvC)
RecFOR pathway proteins
SRM_02885 (ruvC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
Motif
Other DBs
NCBI-ProteinID:
CBH25806
UniProt:
D5HCQ1
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All DBs
Position
3378083..3378622
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AA seq
179 aa
AA seq
DB search
MIILGVDPGSRATGYGLVDPSSGDEHLVAADTIRLADTDDHPTRLKQIYDALVDVIDAHG
PDEFAVEMPVYGQNPQSMLKLGRAQAAAMMAALNRDLPVAQYTPKEVKKSVTGNGNASKK
QVGFMIESILSAGEQTFAHDTADALAIALCHGNRDAHDDGDSYTGWASFVDANPDRVSE
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgattattcttggcgtcgaccccggctctcgcgccaccggctacggcctcgtcgacccc
tccagcggcgacgagcatctcgtggccgccgacaccattcgcctcgcggacaccgacgac
caccccacccgcctgaagcagatctacgacgcgctcgtcgacgtcatcgacgcgcacggc
cccgacgaatttgcggtcgagatgccggtgtacggccaaaatccccagtccatgctgaag
ctggggcgggcccaggccgccgcaatgatggcggccctcaaccgcgacctgcccgtggcc
cagtacaccccgaaggaggtcaaaaagtccgtgacgggcaacggcaacgcctccaagaag
caggtcgggtttatgatcgagtcgatcctctccgccggggagcagaccttcgcgcacgac
accgccgatgccctcgccatcgcattgtgccacggcaaccgcgacgcgcacgacgacggc
gactcctacaccggatgggccagcttcgtcgacgccaatcccgaccgtgtgtcggagtag
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