Salinibacter ruber M8: SRM_03053
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Entry
SRM_03053 CDS
T01209
Symbol
msbA
Name
(GenBank) Lipid A export ATP-binding/permease protein msbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
srm
Salinibacter ruber M8
Pathway
srm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
srm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SRM_03053 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srm02000
]
SRM_03053 (msbA)
Enzymes [BR:
srm01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
SRM_03053 (msbA)
Transporters [BR:
srm02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
SRM_03053 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_30
AAA_22
AAA_21
Zeta_toxin
AAA_29
AAA_25
ABC_ATPase
RsgA_GTPase
nSTAND1
VP1_VP3
AAA_24
MMR_HSR1
NB-ARC
DotU
Motif
Other DBs
NCBI-ProteinID:
CBH25974
UniProt:
D5HD69
LinkDB
All DBs
Position
complement(3573920..3575725)
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AA seq
601 aa
AA seq
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MPETDSTSEEPSLRPERLWTSLRRILRLGWPYRVRLVGAVVLTVVGAAVALVVPLGLREL
VDAVFQQENRALLDWLTVALIVLFLARSAAAFGGKYLLGWTGERVVADLRKKVYQHLHRQ
SLRFFTDHRTGDLTSRLTNDVGSVRSAVKDALPNFLTQSLSLVGSVALMVVLNWRLSLII
FLIVPAVTGFAIYFGRKIRALARDIQDRLADTTAVAEEALASIRVVKAFARSDYEVDRYN
EAVEDLFGTARYRVVVTALFESTVGLLFFAALVAIFWYGGIEVLAGRLTEGDLVAFVFYA
FNIARSVSSMSQLYSTFNSAAGATERLFDLLDTEPHLRDAPDAIDLPPIDGRVRLDDVTF
AYDEGRPVLKDISLDVAAGETVALVGPSGAGKSTLMSLIPRFYAPQEGRVRVDGHDLSDV
SRQSLRAQIASVSQEVHLFNATIGENIRYGRLDASDEAVAEAARAANAHDFIVDLPEGYD
SEVGERGVKLSGGQRQRVAIARALLRDARLLLLDEATSSLDSASEALVQEALERLMEGRT
TFIIAHRLSTVQTADRLFVLDDGRVVQRGTHAELMQAGGLYRRLASYQFREPSGVDEGML
D
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgccggagaccgattctacgtctgaagagccgtcgctccgccccgagcggctgtggacg
tccctccggcgcatccttcggctcgggtggccctaccgggtccgcctcgtgggggccgtg
gtgctcaccgtggtgggggcggcggtggcgctcgtcgtgccgttggggctgcgcgagctg
gtggacgcggtgtttcagcaggaaaaccgggccctgctcgactggctgaccgtggcgctt
atcgtgctctttctggcccggtccgcggcggcctttgggggcaagtacctgctgggctgg
accggcgagcgcgtggtcgcggacctgcgcaagaaggtctaccaacacctccaccggcag
agcctgcggttcttcaccgaccaccggacgggagacctcacctcgcgtctcaccaacgac
gtaggctcggtgcggagcgcggtgaaggacgcgctccccaattttctgacccagtcgctc
tcgctggtgggctcggtggcgctcatggtggtgctcaactggcgcctcagcctcatcatc
ttcctcatcgtgccggccgtcaccgggtttgcgatctacttcgggcgcaagattcgggcg
ctcgcccgcgacatccaggaccggctggccgacacgaccgccgtggcggaggaggccctc
gcgtccatccgcgtcgtcaaggcgtttgcacggtccgactacgaggtggaccgctacaac
gaggcggtggaggacctcttcggcacggcgcgctaccgcgtggtcgtcacggccctattc
gagtcgacggtggggctgcttttcttcgccgccctcgtggcgatcttctggtacggcggc
atcgaggtgctggccgggcggctcacggagggggacctcgtggcgttcgtgttctacgcc
ttcaacatcgcgcggagcgtgagcagcatgtcgcagctctactccaccttcaacagcgcc
gcgggggcgaccgagcgcctgttcgacctgctcgacaccgagccccacctccgcgacgcc
ccggacgccatcgacctgcccccgatcgacggccgtgtgcgcctcgacgacgtgaccttt
gcctacgacgaggggcggcccgtgctcaaggacatctcgctcgacgtggcggcgggcgag
acggtcgccctcgtgggaccgagcggcgcggggaagtcgaccctgatgagcctgattccc
cgcttctacgctccccaggaggggcgtgtccgcgtcgacggccacgacctgagcgacgtc
tcgcgacaatcgctgcgtgcccagatcgcgtccgtgtcgcaggaggtgcaccttttcaac
gccacgatcggggagaacatccgctacgggcggctcgacgcgtccgacgaggcggtggcc
gaggcggcccgcgccgccaacgcgcacgacttcatcgtggacctgcccgagggctacgac
tcggaggtgggcgagcgaggcgtcaagctgagcggcgggcagcgccagcgcgtggccatc
gcccgggccctgttgcgcgacgcgcggctgctgctcctggacgaggccacctcgtccctc
gattcggcgtcggaggccctcgtgcaggaggccctggagcggctcatggaagggcgcacc
acgttcatcatcgcgcaccgcctctccaccgtccagacggccgaccgcctcttcgtgctc
gacgacggccgcgtcgtgcagcgcggcacccacgccgagctgatgcaggcgggcgggctc
taccgccggctcgcgtcgtatcagtttcgggagccgagcggagtcgacgaagggatgctt
gactag
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