Salinibacter ruber M8: SRM_p56012
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Entry
SRM_p56012 CDS
T01209
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase pcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
srm
Salinibacter ruber M8
Pathway
srm03420
Nucleotide excision repair
srm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
srm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SRM_p56012 (pcrA)
03430 Mismatch repair
SRM_p56012 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srm03400
]
SRM_p56012 (pcrA)
Enzymes [BR:
srm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SRM_p56012 (pcrA)
DNA repair and recombination proteins [BR:
srm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SRM_p56012 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
SRM_p56012 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_11
AAA_22
AAA_25
Motif
Other DBs
NCBI-ProteinID:
CBH22730
UniProt:
D5H490
LinkDB
All DBs
Position
pSR56:12234..14552
Genome browser
AA seq
772 aa
AA seq
DB search
MAEPRPQQKEVLGYEGGTMGVAAVPGSGKTWTLTRLAARLVAEADLEARQEVLVVTLVNS
SVDNFSSRIDQLVEQEGMLPDVGYRVCTLHTLAHEIVRARPDLAGLSEDFHVVDDRQSSD
ILRDVAESWYQSNQSKITGYLTGDISDYKRKEVLSEKLPRQVRRVAQNAIKHAKSSGLSP
EALRGYLQDRGAEMPLAEMAQSIYQGYQQALNVQSAVDYDDLIRHALRVLQTDEELLSRL
QHQWPYVLEDEAQDSSRIQQQILQRLAGSQANWVRVGDPNQAIYESFTTADPNLLREFVG
KAGQSPELAQSGRSQPSIIKLANRTIWWSQEKHPNEEVRGALTGPLIRTTSEGDPQPNPP
DRPGRIAFVSGEFTEEEETRKVAAALGPWLEANPEKTCAMLVPVRGMGVDAASRLEEQGI
PYTDSLLKTTSQTREAAQRIERVVEYLAKPTSPARLARCYVQWRSSQVEANGVRDESFSE
GGGKPEGESKPEGKGESEGKSKMEAAKAEIRETSRLVSQIGRPEDYIWPQGRSWLSEVEE
DLTNEQLSRLEAFREKVRYWLELSGLPIGQLIMALGRDFFSDPDRLALVQKFSGLLRRAS
NYNPEWGLPRLSDELEVIAENERRFEGVGSGEADFDPEDHKGEVTISTMHGAKGLEWDRV
HMMGVNDYHFPAAVAGDKFLPEKWFYRDGLNLQAETLAQIDALTGGEPYQEGEATTEARQ
EYARERIRLFYVCVTRAREELMITTNIGRFEDNRPALIFEEMRKIYDEHIAE
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggcagagcctcgcccccagcaaaaagaggtcctcggctacgagggcggtacgatgggc
gtcgccgccgttcccgggagcgggaagacctggaccctaacccgccttgcggctcgtctt
gtggccgaggcggacctggaggcacgtcaagaagtgctcgtggtcacgctcgtcaattcc
tcggtcgacaacttctccagccggattgaccagcttgtcgagcaggaaggcatgcttccg
gacgtcggctaccgcgtttgcacgcttcacacgctcgcccacgagatcgtccgggcccgc
ccggacctcgcgggcctctccgaggactttcacgtggtcgacgaccgccagtccagcgac
attctccgggacgtagccgaaagctggtaccagtccaaccagtcgaagatcaccgggtac
ctcaccggcgacataagcgactacaagcggaaggaggtcctctcagaaaagctccccagg
caggtccgccgggtcgcacaaaacgccatcaaacacgcgaaaagcagcgggctttccccg
gaggcgctccggggctatctccaggaccgcggggcggagatgcccctcgccgagatggct
cagtcgatctaccagggctaccagcaggccctgaatgtccaaagcgccgtcgactacgat
gacctcatccggcatgccctccgggtcctccagaccgacgaggagcttctgtcccgtctc
cagcaccagtggccatacgtcctggaagacgaggcccaggacagcagcaggatccagcag
caaatcctccagcggcttgccgggagccaagcaaattgggtccgcgtcggcgacccgaat
caagcgatctacgagtcgttcacgaccgcagacccgaatctcctgcgcgagtttgtagga
aaggcgggccagagcccggagcttgcccagtcgggccggtcgcagccctcaattattaag
ctggccaatcggacgatctggtggtctcaggaaaagcacccgaacgaggaggtccgtggg
gccttgacagggcctctcatccggacaacttctgaaggagacccgcagcccaaccctccg
gaccgcccaggtcgaattgcgtttgtgagcggggaatttaccgaagaggaggagacccga
aaggtcgctgctgcgctcgggccctggctggaggccaaccccgagaagacctgcgcgatg
ctcgtgccagtccgcgggatgggcgtggatgccgcgtctcgattggaggagcaggggatc
ccctacactgacagcctgctcaagacgaccagccaaacgcgggaggcggcccagcgcatc
gagcgggtggtcgagtacctggccaagcccacgtccccggcccgcctggcccgctgctac
gtgcagtggcgtagctcgcaggtcgaggccaatggggtcagagacgagagcttctccgaa
ggcggaggtaagcctgaaggcgagagtaagccggaaggcaaaggtgagtctgagggcaaa
agcaagatggaggcggccaaggccgagatccgcgagacgagccgcctggtgagccagata
gggcgccccgaagactacatctggccccaggggcgaagctggctttctgaggtggaggag
gacctgaccaacgagcagctctctcggctggaggccttccgggagaaggtccgctactgg
cttgagctttcaggtcttcctatcggccagcttatcatggccctcggccgggactttttc
tccgatccggatcggctcgcgctcgtgcagaagttctccggccttctgcggcgggcgagc
aactacaaccccgagtggggccttccgcgcctctccgacgaactggaggtgatcgccgaa
aacgagcggcggttcgagggggttgggagcggggaggccgacttcgacccggaagaccac
aagggagaggtcaccatctcgacgatgcacggcgcgaaaggcctggagtgggaccgcgtg
cacatgatgggcgtgaacgactaccacttccccgctgccgtggccggggacaagttcctg
ccggagaagtggttctaccgggacgggctcaacctccaggctgagactctcgcccagatc
gacgctttaacaggtggggagccctaccaagaaggcgaggccacaaccgaggcccgccag
gagtatgcccgcgagcggatccggctcttctacgtctgcgtgacccgggcccgcgaggag
cttatgattacgaccaacatcggccggtttgaagacaaccgccccgctttaattttcgag
gagatgcgcaagatctacgatgaacacatcgccgaatag
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