Streptomyces rubrolavendulae: A4G23_00035
Help
Entry
A4G23_00035 CDS
T04616
Symbol
pel_1
Name
(GenBank) Pectate trisaccharide-lyase precursor
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
srn
Streptomyces rubrolavendulae
Pathway
srn00040
Pentose and glucuronate interconversions
srn01100
Metabolic pathways
srn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
srn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
A4G23_00035 (pel_1)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A4G23_00035 (pel_1)
Enzymes [BR:
srn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
A4G23_00035 (pel_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
AOT57249
UniProt:
A0A1D8FVL2
LinkDB
All DBs
Position
complement(47411..48973)
Genome browser
AA seq
520 aa
AA seq
DB search
MRRPAALRLSAALATMALAATAGVTLSTSEASAATGSATGYATQNGGTTGGAGGQTVRAT
TGTAIHAALCNRPADNTPITIQVEGTINHGNTAKVSGTSCNTAAGVIELKQISNVTIVGV
GSGAVFDQLGIHIRESSNIIIQNVTVRNVKKSGSPTSNGGDAIGMEKNVRNVWVDHVTLE
ASGGEAQGYDGLFDMKDDTRYVTLSYSVLRNSGRGGLVGSSESDLANSFITYHHNRYENI
DSRAPLLRGGTAHMYNNHYVRLHSSGINSRAGAKARVDSNYFEDSKDVLGTFYTSAAGYW
QVSGNVFDNVTWSSPGDENNPAGPDPRSNTTVGIPYAYSLDRADCVPEIVSRTAGAGKGL
LVSDGACSPQSPAPTSSAPAPSEPAPSPTVPTPGPTQPTGRNLSIGAGSDGSGKAEGTSY
GDVRDGDMGTYWSPDGPTGAISIKWASPTAVSLVDIREASGFGGSVDGWRLVDGDTGTVL
ASGQGAGLVAFPRTTLRKITFEITSSRGTVRVAEYETYAG
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgagacgaccagccgcactgcggctctccgcggcgttggccaccatggccctcgcggcc
acggccggcgtgacgctgtcgacgtcagaggcgtcggcggcgaccgggagcgccaccggc
tacgcgacccagaacggcgggaccaccggcggagcgggcgggcagacggtgcgggccacc
acgggaaccgcgatccacgcggccctgtgcaaccggcccgccgacaacacgccgatcacc
atccaggtcgagggcaccatcaaccacggcaacaccgccaaggtgtcgggcaccagctgc
aacaccgcggccggcgtcatcgaactcaagcagatcagcaacgtcacgatcgtcggagtc
ggcagcggagccgtcttcgaccagctgggcatccacatccgcgagtccagcaacatcatc
atccagaacgtgaccgtccggaacgtcaagaagtccgggtcccccacgtccaacggcggt
gacgccatcggcatggagaagaacgtccgcaacgtctgggtcgaccacgtcacgctggag
gcctccggcggggaggcgcagggttacgacggcctgttcgacatgaaggacgacacccgc
tacgtgaccctctcctacagcgtcctgcgcaactccggtcgcggcggcctcgtcggctcc
agcgagagcgacctcgcgaacagcttcatcacgtaccaccacaaccggtacgagaacatc
gactcccgtgcgcccctgctccggggcgggacggcccacatgtacaacaaccactacgtg
cgcctccactcctccggcatcaactcccgtgcgggagccaaggcgagggtggacagcaac
tacttcgaggactccaaggacgtcctcggcacgttctacacgtccgccgccggctactgg
caggtgagcgggaacgtgttcgacaacgtgacgtggtccagccccggtgacgagaacaac
ccggcggggccggacccgcgctccaacaccacggtcggcatcccctacgcgtacagcttg
gaccgggcggactgcgtaccggagatcgtgagccggacggcgggtgcgggcaaggggctc
ctggtgtcggacggggcgtgctcgccgcagagccccgcacccacgtccagcgcgcccgcc
ccgagtgagcccgccccctctcccaccgttcccacgccggggccgacgcagccgaccggc
aggaacctcagcatcggagccggctccgacgggtccggcaaggccgagggaacgagctac
ggcgacgtgcgcgacggcgacatgggcacgtactggtcgccggacggcccgaccggcgcc
atctccatcaagtgggcgtccccgaccgcggtctccctggtcgacatccgggaggcgtcc
ggcttcggcggctctgtcgacggctggcggctggtcgacggtgacacgggaacggtcctg
gcgtccggacagggtgcgggactggtcgccttcccccgtaccactctgcggaagatcacc
ttcgagatcacgagttcgcggggcaccgtgcgggtcgccgagtacgagacctacgccggc
tga
DBGET
integrated database retrieval system
