Streptomyces rubrolavendulae: A4G23_00222
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Entry
A4G23_00222 CDS
T04616
Name
(GenBank) Eukaryotic DNA topoisomerase I, catalytic core
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
srn
Streptomyces rubrolavendulae
Brite
KEGG Orthology (KO) [BR:
srn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srn03032
]
A4G23_00222
03400 DNA repair and recombination proteins [BR:
srn03400
]
A4G23_00222
Enzymes [BR:
srn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
A4G23_00222
DNA replication proteins [BR:
srn03032
]
Prokaryotic type
DNA Topoisomerases
A4G23_00222
DNA repair and recombination proteins [BR:
srn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
A4G23_00222
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AOT57435
UniProt:
A0A1D8FWC9
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All DBs
Position
complement(278410..279438)
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AA seq
342 aa
AA seq
DB search
MRLAHVRPTDPGHTRVRHGRGFRYLDPSGGPLRDPAELTRVKALVIPPAWRDVWICARPN
GHLQAVGTDAAGRRQYLYHPVFRARQEQAKHDHVLELAEALPRVREAVEAGLATRGLTRE
RVLATAVRLLDLGFLRVGGERYADRNQTYGLTTLLRDHSTRTRGEIVLSYPAKHGRQRVH
AVADEPTLRALTALARRGGGGERLLAYWEGRAWHDVSGAEVNAYLRDLAGVEATAKDFRT
WHATVMAAVALAVSETVAHSETARRRAVARAVREVAGYLGNTPAVCRASYINPRVVELYE
EGVTVAPTLPSLGAGAVHGLPATHGPAERAVLRMLRDGRPPG
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcctcgcccacgtccggcccaccgatccgggccacacccgcgtccgccacgggcgc
ggcttccgctatctggacccgagcggcggaccgctgcgcgacccggcggagctgacccgg
gtcaaggccctcgtcatcccgcccgcgtggcgggacgtgtggatctgcgcccggcccaac
ggccacctccaggccgtcggcacggacgccgcgggacggcgccagtacctgtaccacccg
gtcttccgcgcccggcaggagcaggccaagcacgaccacgtcctggagctcgccgaggcc
ctgccccgcgtccgggaggccgtcgaggcgggcctggccacgcggggcctgacccgcgag
cgcgtcctcgccaccgccgtgcgcctcctcgacctcggcttcctgcgcgtcggcggcgag
cggtacgccgaccggaaccagacgtacgggctgaccaccctgctgcgcgaccactccacc
cgcacccgcggcgagatcgtcctcagctacccggcgaagcacggcaggcagcgcgtccac
gccgtcgccgacgagccgacgctgcgcgccctcaccgcgctcgcgcgccgcgggggcggc
ggcgagcggctcctcgcgtactgggagggccgcgcctggcacgacgtcagcggcgccgag
gtcaacgcgtacctgcgcgacctcgccggcgtcgaggccaccgcgaaggacttccgcacc
tggcacgccaccgtcatggcggccgtcgccctcgccgtctccgaaaccgtcgcgcacagc
gagaccgcgcgccgccgcgccgtcgcacgggccgtgcgcgaggtcgccggctacctcggc
aacacgcccgcggtgtgccgggcgtcctacatcaacccgcgcgtcgtcgaactgtacgag
gagggcgtcacggtcgcccccaccctgccctcgctcggcgccggtgccgtccacggcctc
cccgccacccacggccccgccgaacgggccgtcctgcggatgctgcgcgacggccgcccg
cccggctga
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