Streptomyces rubrolavendulae: A4G23_00712
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Entry
A4G23_00712 CDS
T04616
Symbol
sigF_2
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
srn
Streptomyces rubrolavendulae
Brite
KEGG Orthology (KO) [BR:
srn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srn03021
]
A4G23_00712 (sigF_2)
Transcription machinery [BR:
srn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A4G23_00712 (sigF_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
MarR_2
HTH_24
NirdL-like_HTH
HTH_23
HTH_AsnC-type
HTH_31
KORA
MarR
HTH_37
HTH_IclR
DUF7343
HTH_3
HTH_11
HTH_27
Sigma70_ECF
DinB_2
DUF134
Motif
Other DBs
NCBI-ProteinID:
AOT57916
UniProt:
A0A1D8FXN5
LinkDB
All DBs
Position
complement(854497..855354)
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AA seq
285 aa
AA seq
DB search
MSTAITTPTETTAPAPATPLPRVPDPTEVAPRDAKELSKQFFARLAVLEEGTEEYQYVRN
TLIELNLSLVKYAAARFRSRSDQMEDIVQVGTIGLIKAIDRFELSREVEFATFAMPCVVG
EIKRFFRDTSWSVHVPRRLQELRIDIARATDELFQRLDRSPTAAELADHLGLTEDEVIEG
LVAANGYTAASLDMPLDESGEPASATLADMIGEEDRDMRLTEDVQALKPLLAQLDERDRA
ILRMRFGEELTQAEIGERLGVSQMHVSRLLARMTKRMREGMLRED
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
gtgtccacggcgatcacgaccccgacggagacgacggcacccgcgcccgcgaccccgctg
ccgcgggtccccgacccgaccgaggtcgcaccccgggacgccaaggagctctcgaagcag
ttcttcgcgcgcctcgcggtcctggaggaggggaccgaggagtaccagtacgtccggaac
acgctcatcgagctgaacctgtccctggtcaagtacgcggccgcgcgcttccgcagccgc
tccgaccagatggaggacatcgtccaggtcggcacgatcgggctgatcaaggccatcgac
cggttcgagctgagccgcgaggtcgagttcgcgaccttcgcgatgccctgcgtggtcggc
gagatcaagcgcttcttccgggacacgagctggtccgtgcacgtcccccgcaggctccag
gagctgcggatcgacatcgcccgcgcgaccgacgagctgttccagcggctcgaccggtcc
ccgacggcggcggagctcgccgaccacctcggcctcaccgaggacgaggtgatcgaggga
ctggtggccgccaacggctacaccgcggcgtcgctcgacatgcccctcgacgagtcgggc
gagcccgcctcggccacgctcgccgacatgatcggcgaggaggaccgcgacatgcggctc
accgaggacgtccaggcgctcaagccgctcctggcgcagctcgacgagcgcgacagggcc
atcctgcggatgcggttcggcgaggagctgacgcaggccgagatcggtgagcggctcggc
gtctcgcagatgcacgtctcccggctgctggcccggatgacgaagcggatgcgcgagggc
atgctccgcgaggactga
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