Streptomyces rubrolavendulae: A4G23_01105
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Entry
A4G23_01105 CDS
T04616
Symbol
pel_2
Name
(GenBank) Pectate lyase precursor
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
srn
Streptomyces rubrolavendulae
Pathway
srn00040
Pentose and glucuronate interconversions
srn01100
Metabolic pathways
srn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
srn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
A4G23_01105 (pel_2)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A4G23_01105 (pel_2)
Enzymes [BR:
srn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
A4G23_01105 (pel_2)
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Gene cluster
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Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
AOT58296
UniProt:
A0A1D8FYQ3
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All DBs
Position
complement(1287890..1289278)
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AA seq
462 aa
AA seq
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MPRKCHAQVTRRAVSLAGGTALVLTLTGLAAPAAPAAPPAGPPTAPDGAAPAAGAPAFAA
GWAHGRDLHRQTLPAGDGWASADGGTTGGAAADAAHVHTVTTWAQFRAALAAGDGPRVIR
VVGTLDATEGGCEVFEAPGYDFDRYLAAYDPAVWGYEKEVSGPQEDLRAASAKNQERAVK
AYVPSDTTIVGVGRGAGITGGSLQIKDADNVIVRNLTLESPLDCFPQWDPTDGATGAWNS
EYDSMVVYNSTHVWIDHNTFTDGRHPDSTLPRHYGELYQRHDGELDIVRGADLVTASWNV
FADHDKTLMIGNSDSAGPTDRGRLRVTLHHNLFTHVVERAPRVRFGKVDVYNNHYVVSRD
GYAYSFGIGAESQLVAEKNSFRLPEGVPAGRILKKWKDAPVTVAGNHVNGRPVDLLAAHN
ARFPDEALRADAGWRPTLRTRVDHPGVLPALLAHHAGAGRLR
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgccccgcaagtgtcatgcgcaggtcaccagaagagccgtgtcgctggccggcggcacc
gcgctggtgctcaccctcaccggactcgccgcccccgccgcccccgccgcaccccccgcc
gggcctccgacggcccccgacggcgccgccccggcggcgggcgcacccgccttcgccgcc
gggtgggcgcacggccgcgacctccaccggcagaccctgcccgccggcgacggctgggcc
tccgccgacggcggcaccacgggcggcgccgccgcggacgcggcgcacgtccacaccgtc
accacgtgggcgcagttccgcgccgccctcgccgccggcgacggcccgcgcgtcatccgc
gtggtcggcacgctcgacgccaccgagggcggctgcgaggtcttcgaggcccccggctac
gacttcgaccggtacctggccgcctacgacccggccgtctgggggtacgagaaggaggtc
agcgggccccaggaggacctgcgcgccgcctccgcgaagaaccaggagcgggccgtcaag
gcgtacgtcccctccgacacgaccatcgtcggcgtcggccgcggcgccgggatcaccggc
ggcagcctccagatcaaggacgccgacaacgtcatcgtccgcaacctcaccctggagagc
cccctcgactgcttcccgcagtgggaccccacggacggggcgaccggcgcgtggaactcc
gagtacgactcgatggtcgtgtacaactccacgcacgtgtggatcgaccacaacacgttc
accgacgggcgccacccggacagcaccctgccccgccactacggcgagctgtaccagcgg
cacgacggcgaactcgacatcgtgcgcggcgcggacctggtgacggcctcctggaacgtc
ttcgccgaccacgacaagaccctgatgatcggcaacagcgacagcgcgggccccaccgac
cgcggccggctgcgggtcaccctccaccacaacctcttcacccacgtggtcgagcgggcg
ccccgcgtccggttcggcaaggtcgacgtgtacaacaaccactacgtggtgtcccgcgac
gggtacgcctacagcttcggcatcggtgccgagtcgcagctggtggcggagaagaactcg
ttccggctgccggagggcgtaccggccgggcggatcctcaagaagtggaaggacgcgccg
gtcaccgtcgcgggcaaccacgtcaacggccgcccggtggacctgctggcggcgcacaac
gcgcggttccccgacgaggcgctgcgcgccgacgcgggctggcggccgacgctgcgcacc
cgggtcgaccacccgggcgtgctgcccgccctcctcgcccaccacgcgggcgcgggccgc
ctgcgctga
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