Streptomyces rubrolavendulae: A4G23_01194
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Entry
A4G23_01194 CDS
T04616
Symbol
polA_1
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
srn
Streptomyces rubrolavendulae
Pathway
srn03030
DNA replication
srn03410
Base excision repair
srn03420
Nucleotide excision repair
srn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A4G23_01194 (polA_1)
03410 Base excision repair
A4G23_01194 (polA_1)
03420 Nucleotide excision repair
A4G23_01194 (polA_1)
03440 Homologous recombination
A4G23_01194 (polA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srn03032
]
A4G23_01194 (polA_1)
03400 DNA repair and recombination proteins [BR:
srn03400
]
A4G23_01194 (polA_1)
Enzymes [BR:
srn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A4G23_01194 (polA_1)
DNA replication proteins [BR:
srn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
A4G23_01194 (polA_1)
DNA repair and recombination proteins [BR:
srn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
A4G23_01194 (polA_1)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A4G23_01194 (polA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
NYN_YacP
HHH_5
DNA_pol_lambd_f
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AOT58385
UniProt:
A0A1D8FYZ3
LinkDB
All DBs
Position
complement(1395392..1398046)
Genome browser
AA seq
884 aa
AA seq
DB search
MDGHSLAYRAFFALPAENFTTSGGQTTNAVYGFASMLANTLRDEAPTHFAVAFDVSRKTW
RTQDFPEYKANRSSTPDEFKGQVQLIGELLDTMNAVRFAVEGFEADDIIATLATQAEAAG
YEVLIVTGDRDSFQLVTDHVTVLYPTKGVSELTRFTPEKVQEKYGLSPSQYPDFAALRGD
PSDNLPGIPGVGEKTATKWITQFGSFAELVERADEVKGKVGQALRDHLEAVKLNRHLTEL
VRDVELPKQVAELERAPYDRTALKGFLEVLEIRNPSLRDRLLAVDPGAEEEAAPAPAAGV
ELDGAVLGSGELAPWLERHGAGPLGMATVDSWALGVGSVSEVALATADGAAAWFDPSQLD
EGDERAFAAWVADPARPKVLHNAKAAMRVFPEHGWNVAGVTMDTALAAYLVKPGRRSFAL
DALAVEYLGRELAPPSADGQLAFGADETAEADALMTQARAVLDLGEAFTARLEEVGATRL
LHEVELPTSELLARMERYGIAADRPHLEAMEQQFAGAVQQAVKEAHASVGHEFNLGSPKQ
LQEVLFGELNLPKTKKTKTGYTTDADALAWLAAQTEHELPVLMLRHREQAKLRVTVEGLI
KTVAGDGRIHTTFNQTVAATGRLSSTDPNLQNIPVRTDEGRAIRRGFVVGEGFDALMTAD
YSQIELRVMAHLSEDAGLIEAFTSGEDLHTTVASQVFGVDKSAVDAEMRRKIKAMSYGLA
YGLSAFGLSQQLNIEAAEARALMDTYFERFGGVRDYLRRVVDEARATGYTETMLGRRRYL
PDLNSDNRQRREMAERMALNAPIQGTAADIVKVAMLNVDRALTEARLDSRMLLQVHDEIV
LELAPGERERVEEIVRREMASAVELRAPLDVSVGVGRDWESAAH
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggacgggcactccctggcgtaccgggcgttcttcgccctgcccgcggagaacttcacg
acgtccggcgggcagacgaccaacgccgtctacggcttcgcgtcgatgctggcgaacacg
ctgcgcgacgaggcgcccacccacttcgcggtggcgttcgacgtgtcccgcaagacgtgg
cgcacgcaggacttcccggagtacaaggcgaaccgctcgtcgacgcccgacgagttcaag
ggccaggtgcagctgatcggcgagctgctggacacgatgaacgccgtgcgcttcgccgtg
gaggggttcgaggcggacgacatcatcgccacgctcgccacgcaggccgaggcggccggt
tacgaggtgctgatcgtcaccggcgaccgggactccttccagctggtcaccgaccacgtg
acggtgctgtacccgacgaagggcgtctcggagctgacccgcttcaccccggagaaggtg
caggagaagtacgggctgtccccgagccagtacccggacttcgccgcgctgcgcggcgac
ccgtcggacaacctgccgggcatccccggcgtgggcgagaagacggccaccaagtggatc
acccagttcggttcgttcgcggagctggtcgagcgggcggacgaggtgaagggcaaggtc
ggccaggccctgcgcgaccacctggaggcggtgaagctcaaccgccacctcaccgagctg
gtgcgggacgtggagctgcccaagcaggtggccgagctggagcgcgccccgtacgaccgg
acggcgctgaagggcttcctggaggtcctggagatccgcaacccgagcctgcgggaccgg
ctgctcgccgtggacccgggcgccgaggaggaggccgcccccgccccggccgccggggtg
gagctggacggtgcggtgctgggctccggcgagctggcgccctggctggagcggcacggg
gccgggccgctgggcatggccacggtcgacagctgggccctgggcgtcggcagcgtctcc
gaggtcgccctcgcgacggcggacggggcggcggcctggttcgacccgtcgcagctggac
gagggcgacgagcgggccttcgccgcgtgggtcgcggacccggcccgcccgaaggtcctg
cacaacgcgaaggccgccatgcgggtcttcccggagcacggctggaacgtcgccggggtc
accatggacacggcgctcgccgcgtacctggtgaagccgggccgccgctccttcgccctg
gacgccctcgccgtggagtacctggggcgggagctcgccccgccgtccgccgacggccag
ctcgccttcggcgcggacgagaccgcggaggccgacgcgctgatgacccaggcccgcgcg
gtcctcgacctgggtgaggcgttcacggcccgcctggaggaggtcggggcgacgcggctg
ctgcacgaggtggagctgcccacgtccgagctgctcgcccgcatggagcggtacggcatc
gccgcggaccggccgcacctggaggcgatggagcagcagttcgccggcgcggtccagcag
gccgtcaaggaggcgcacgcctcggtcggccacgagttcaacctgggctcgcccaagcag
ctccaggaggtcctcttcggcgagctgaacctgccgaagaccaagaagacgaagaccggc
tacacgacggacgcggacgcgctggcctggctcgccgcgcagaccgagcacgaactgccc
gtgctcatgctgcgccaccgggagcaggcgaagctccgcgtcacggtggagggcctgatc
aagacggtcgcgggcgacggccgcatccacaccacgttcaaccagacggtcgccgcgacc
ggccgcctgtcgtccaccgacccgaacctgcagaacatcccggtccgcacggacgagggc
cgcgccatccgccggggcttcgtcgtcggcgagggcttcgacgcgctgatgaccgcggac
tacagccagatcgagctgcgggtcatggcgcacctgtcggaggacgcgggcctgatcgag
gcgttcacctccggcgaggacctgcacaccacggtcgcctcccaggtgttcggcgtcgac
aagtccgcggtcgacgccgagatgcgccgcaagatcaaggcgatgtcgtacgggctcgcc
tacgggctgtccgcgttcggtctgtcccagcagctgaacatcgaggccgccgaggcgcgg
gccctgatggacacgtacttcgagcggttcggcggcgtacgggactacctgcggcgcgtc
gtcgacgaggcccgcgccaccgggtacaccgagacgatgctcggccgccgccggtacctg
ccggacctcaacagcgacaaccggcagcgccgcgagatggccgagcggatggcgctcaac
gcgccgatccagggcacggccgccgacatcgtgaaggtcgccatgctcaacgtcgaccgg
gcgctgaccgaggcccggctggactcccggatgctgctccaggtgcacgacgagatcgtg
ctggagctcgcgccgggggagcgggagcgggtcgaggagatcgtgcgccgcgagatggcg
tcggcggtcgagctgcgggccccgctggacgtgtccgtgggcgtcggccgcgactgggag
tccgccgcgcactga
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