Streptomyces rubrolavendulae: A4G23_02588
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Entry
A4G23_02588 CDS
T04616
Name
(GenBank) RNA polymerase sigma factor
Organism
srn
Streptomyces rubrolavendulae
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Gene cluster
GFIT
Motif
Pfam:
NPCBM
Sigma70_r2
zf-HC2
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
AOT59742
UniProt:
A0A1D8G2R2
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Position
3041517..3043370
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AA seq
617 aa
AA seq
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MADSVLPPAVELPPSDAELVQRMRGGDDSAYAELFRRHSAAVLRYARTCCRDDHTADDLT
AEVFARTLQAVRRGAGPEQAVRAYLLTTVRRVAAAWTRTSRREQLVEDFAVFAAEAAGAV
EPGRGDTVEVGADVRAMQEAERSLALRAFRSLPERWQAVLWHTAVEEESPSQVAPLFGLT
ANATAVLASRAREGLKQAYLQAHVSQSLTAGGDCARYADRLGAYARGGLRMRAERGLRRH
LEECAKCRLAAGELAQVNAGIPALLPVAFIGWFATGFSLKAAGIVAGSAAGAAGAAGAAA
AAGGTAGAAGAGGAAGASGVSGASGGAAGGAAAEGLGAPAKLGAAAALAAAATVGLVWAL
AGDPGPVPKPVAPPPVAAQPVVPPVVGPPTPAPRPEPPRMEAVSAPQPAPAPSTAPRPVP
SPVPPAPAPPAPTPPPSTPPAPTPTPTSTPPPEPAPEPPPAPTPAPDPEPAAVTYQVGRL
PYDLTGDRSGPELRRSGSGWVWQRNGLSIGGTAYGHGITVHARSAVTVDLNRECSTYQAV
VGVDDLTMGIGSVRFSVWADGVRLWQSPAVDGGDPAVPVRVGIAGRATIRLVTEPSRPSG
AIALADWADARISCAGE
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
gtggcggattcggtgctgccgccggcggtggagctgccgccgtccgacgccgagctggtg
cagcggatgcggggcggcgacgactccgcgtacgcggagctgttccggcggcactccgcg
gccgtgctgcggtacgcgcgcacctgctgccgggacgaccacaccgccgacgacctgacg
gccgaggtgttcgcccggaccctgcaggcggtgcggcgcggggccgggcccgagcaggcc
gtgcgggcgtatctgctgacgaccgtccggcgtgtcgccgcggcctggacgaggacctcc
aggcgggaacagctcgtcgaggacttcgcggtcttcgccgcggaggccgcgggcgcggtg
gagccgggccgcggggacaccgtcgaggtgggcgccgacgtgcgggccatgcaggaggcc
gagcggtcgctcgccctgcgggcgttccggtcgctgccggagcgctggcaggcggtgctg
tggcacacggccgtcgaggaggagtcgccgagccaggtggcgccgttgttcgggctgacc
gccaacgccacggccgtactggcgagccgcgcccgggaagggctgaagcaggcctacctc
caggcgcacgtcagccagtccctgacggcgggcggcgactgcgcccgctacgccgaccgg
ctcggcgcgtacgcgcgcggcggcctgcggatgcgggccgagcgggggctgcgcaggcac
ctggaggagtgcgccaagtgccggctggcggccggtgagctggcgcaggtcaacgccggc
atcccggcgctgctgccggtggccttcatcggctggttcgccaccgggttctcgctgaag
gcggcgggcatcgtcgcggggagtgcggcgggtgcggcgggcgcggccggtgcggctgcc
gcggcgggcggcacggccggggctgcgggggcgggtggagcagcgggggcttcgggagtc
tcgggggcctccggtggcgcggccggtggcgccgccgcggaagggctgggcgcgcccgcg
aagctgggggccgccgccgcgctggccgccgcggcgaccgtcggactcgtgtgggcgctg
gcgggggaccccggccccgtgccgaagccggtggcgcctccgcccgtggcggcgcagccg
gtcgtaccgcctgtcgtcgggcctccgacgcccgcgccccggccggaaccgccgcgcatg
gaggccgtgtccgcgccgcagcccgccccggcgccgtccacggcgcccaggcccgtgccc
tcgccggtgcccccggcaccggcgccaccggcccccacacccccgccctcgaccccaccc
gcgcccacgcccaccccgacgtccactccgccgccggagcccgcccccgaaccgcccccc
gcgccgaccccggcgccggacccggagcccgcggcggtcacgtaccaggtggggcggctg
ccgtacgacctgaccggcgaccgcagcgggcccgagctgcggcgcagcgggtcgggctgg
gtgtggcagcggaacgggctgtccatcggcggcacggcgtacggccacggcatcaccgtg
cacgcccggtcggcggtgacggtcgacctgaaccgggagtgctccacgtaccaggcggtc
gtcggggtggacgacctgacgatggggatcggctcggtcaggttctcggtgtgggcggac
ggggtccggctctggcagtctcctgcggtcgacggcggtgacccggccgtcccggtgcgc
gtgggcatcgccgggcgggcgacgatccgcctggtgacggagccgtcccggccgtccggc
gccatcgcgctggccgactgggcggacgctcggatcagttgtgcgggagagtga
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