Streptomyces rubrolavendulae: A4G23_02836
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Entry
A4G23_02836 CDS
T04616
Symbol
sigF_5
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
srn
Streptomyces rubrolavendulae
Brite
KEGG Orthology (KO) [BR:
srn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srn03021
]
A4G23_02836 (sigF_5)
Transcription machinery [BR:
srn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A4G23_02836 (sigF_5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
MarR_2
HTH_Crp_2
NirdL-like_HTH
MarR
HTH_3
HTH_Tnp_4
DUF134
HTH_37
DUF4423
DUF7343
Motif
Other DBs
NCBI-ProteinID:
AOT59975
UniProt:
A0A1D8G3G2
LinkDB
All DBs
Position
complement(3331287..3332420)
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AA seq
377 aa
AA seq
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MNVPASTTPHQVPPQNEPTSQSTRAGGPAPEPRTGHPAPAGQEPQAPHHTAPQAPQRAQT
LTAPPTAPPATPAAPAAPAAPATPPPAPPAAPPAPTAPPAASPTAPPAASPASPAASARD
ARVRRTADTRALTQVLFGELKRLERGTPEHARVRAALIEANLPLVRYAAARFRSRNEPME
DVVQVGTIGLINAIDRFDPDRGVQFPTFAMPTVVGEIKRYFRDNVRTVHVPRRLHELWVQ
VNGATEDLTTLHGRSPTTAEIAERLKISEEEVLSCIEAGRSYHATSLEAAQEGDGLPGLL
DRLGYEDPALAGVEHRDLVRHLLVQLPEREQRILMLRYYRNLTQSQISQELGVSQMHVSR
LLARSFARLRSANKIDA
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgtgccggccagtaccacgcctcaccaggtgccaccccagaacgagccgacgagc
cagtccacccgggccggaggcccggccccggaaccgcgcaccgggcaccccgccccggcg
ggccaggagccccaggccccgcaccacaccgcaccgcaggccccgcagcgcgcccagacc
ctcaccgcgccgccgaccgcaccaccggccacccccgctgccccggccgcacccgccgcc
ccggccacgccgccacccgcacccccggccgcgccgcccgccccgaccgcacccccggca
gcgtcaccgaccgcacccccggcagcgtcacccgcctcgccggccgcctccgcgcgggac
gcccgcgtccgccgcaccgccgacacccgggcgctcacccaggtcctcttcggcgagctg
aagcggctggagcgcggcaccccggagcacgcccgcgtccgcgccgccctgatcgaggcc
aacctcccgctcgtccggtacgccgccgcccgcttccgctcgcgcaacgagccgatggag
gacgtcgtccaggtcggcacgatcggcctgatcaacgccatcgaccgcttcgaccccgac
cggggcgtgcagttcccgacgttcgcaatgcccaccgtcgtcggcgagatcaagcggtac
ttccgcgacaacgtccgcacggtccacgtcccccgccgcctccacgagctgtgggtgcag
gtcaacggcgccaccgaggacctgaccaccctgcacggccggtcccccacgaccgccgag
atcgccgagcggctgaagatctcggaggaggaggtcctgtcctgcatcgaggccggccgc
tcgtaccacgccacctcgctcgaagcagcgcaggagggcgacgggctgccgggcctgctc
gaccgcctcggctacgaggaccccgccctcgccggggtggagcaccgggacctcgtgcgg
cacctgctcgtccagctccccgagcgcgagcagcggatcctgatgctccgctactaccgg
aacctgacgcagtcccagatcagccaggagctcggcgtctcccagatgcatgtgtcaagg
cttctcgcccgcagcttcgcccggttgagatccgcaaacaagatcgatgcctga
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