Streptomyces rubrolavendulae: A4G23_03395
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Entry
A4G23_03395 CDS
T04616
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
srn
Streptomyces rubrolavendulae
Pathway
srn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
srn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A4G23_03395 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srn03021
]
A4G23_03395 (rpoA)
03400 DNA repair and recombination proteins [BR:
srn03400
]
A4G23_03395 (rpoA)
Enzymes [BR:
srn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A4G23_03395 (rpoA)
Transcription machinery [BR:
srn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A4G23_03395 (rpoA)
DNA repair and recombination proteins [BR:
srn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A4G23_03395 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
AOT60520
UniProt:
A0A1D8G4Y8
LinkDB
All DBs
Position
3919745..3920767
Genome browser
AA seq
340 aa
AA seq
DB search
MLIAQRPSLTEEVVDEYRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDLILNIKQLVVSSEHDEPVVMYLRKQGPGLVTAADIAPPAGVEVHN
PDLVLATLNGKGKLEMELTVERGRGYVSAVQNKQAGQEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKQAMRPRDAMASAGKTLVELFGLARELNIDAEGIDMGPSPTD
AALAADLALPIEELELTVRSYNCLKREGIHSVGELVARSEADLLDIRNFGAKSIDEVKAK
LAGMGLALKDSPPGFDPTAAADAFGADDDADAGFVETEQY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcgctcagcgtccctcgctgaccgaagaggtcgtcgacgagtaccgctcgcgg
ttcgtcatcgagccgctggagccgggcttcggctacacgctcggcaacagcctccgccgc
acgctcctctcctcgatcccgggtgcggccgtcacgtccatccgcatcgacggcgtcctg
cacgagttcaccaccgtgccgggtgtcaaggaggacgtcaccgacctcatcctcaacatc
aagcagctggtcgtgtccagcgagcacgacgagcccgtcgtgatgtacctgcgcaagcag
ggcccgggcctcgtgaccgccgccgacatcgccccgccggccggtgtcgaggtgcacaac
cccgacctggtcctcgccacgctcaacggcaagggcaagctggagatggagctgaccgtc
gagcgcggtcgcggctacgtctccgccgtgcagaacaagcaggccggccaggagatcggc
cgcatcccggtcgactccatctactcgcccgtcctcaaggtcacctacaaggtcgaggcg
acccgagtcgagcagcgcaccgacttcgacaagctcatcgtcgacgtcgagaccaagcag
gccatgcgcccgcgcgacgccatggcgtccgccggcaagaccctggtcgagctgttcggt
ctcgcccgcgagctgaacatcgacgccgagggcatcgacatgggcccgtcccccacggac
gccgccctcgccgccgacctggcgctgccgatcgaggagctggagctcacggtccgctcc
tacaactgcctcaagcgcgagggcatccactccgtgggtgagctcgtcgcccgctccgag
gcggacctcctcgacatccgcaacttcggtgcgaagtcgatcgacgaggtcaaggcgaag
ctggccggcatgggcctggccctcaaggacagcccgcccggattcgacccgaccgccgcc
gccgacgccttcggcgccgacgacgacgcggacgccggtttcgtcgagaccgagcagtac
tga
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