Streptomyces rubrolavendulae: A4G23_03803
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Entry
A4G23_03803 CDS
T04616
Symbol
uvrD2
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
srn
Streptomyces rubrolavendulae
Pathway
srn03420
Nucleotide excision repair
srn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
srn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A4G23_03803 (uvrD2)
03430 Mismatch repair
A4G23_03803 (uvrD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srn03400
]
A4G23_03803 (uvrD2)
Enzymes [BR:
srn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A4G23_03803 (uvrD2)
DNA repair and recombination proteins [BR:
srn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A4G23_03803 (uvrD2)
MMR (mismatch excision repair)
Other MMR factors
A4G23_03803 (uvrD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
C1_1
Zn_ribbon_TiaS
Motif
Other DBs
NCBI-ProteinID:
AOT60928
UniProt:
A0A1D8G668
LinkDB
All DBs
Position
4389416..4391599
Genome browser
AA seq
727 aa
AA seq
DB search
MTPATHSTLFPQVPDSADAVLDGLDPEQREVATALHGPVCVLAGAGTGKTRAITHRIAYG
VRAGILQPASVLAVTFTNRAAGEMRGRLRQLGAGGVQARTFHSAALRQLQYFWPKAVGGD
LPRLIDRKAQLVADAATRCRIRLDRTELRDVTSEIEWAKVTQTVPADYPAAVAKAQRDAP
RDPAETCQVYAMYEQLKRERDVLDFEDVLLLTVGVLQDRHDIAEQVRRQYQHFVVDEYQD
VSPLQQRLLDLWLGDRDSLCVVGDASQTIYSFTGATPDYLLDFRTRHPHATVVKLVRDYR
STPQVVHLANGLLAQASGRAADHRLELVSQRGPGPEPVYTEYGDEPTEAEGTARRIRDLV
ASGVPAGEIAVLYRVNAQSEIYEQALADAGVPYQLRGAERFFERQEVREAGAALRSAARF
GGNDSLLDDVVDLPSQVRAVLSTKGWTTEPPAGSGAVRDRWESLAALVRLAEDLARARPQ
ATLADLVTELDERAAAQHAPTVQGVTLASLHAAKGLEWDAVFLVGLTEGMLPITYARTDE
QVEEERRLLYVGVTRARSHLSLSWSLSRSPGGRPHREPSRFLKGLRPGSGAPAPRTVRAA
GGAERGAAGPARARRARGPVRCRVCGTTLTVAGEMKLMRCEDCPSEMDEGLYARLLDWRA
ARARRIGQPDYCVFTEKTLIAIAETVPSTDAELAAIPGVGIRKLNRFGAEVLAICAGGEG
VDEDGED
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
gtgacaccagcgacccactccaccctcttcccgcaggtccccgactcggccgacgcggtg
ctcgacgggctcgacccggagcagcgcgaggtggcgacggccctgcacggcccggtgtgc
gtcctggcgggcgccggcacgggcaagacgagggcgatcacccaccgcatcgcctacggg
gtgcgcgccgggatcctccagcccgccagcgtgctggccgtcacgttcaccaaccgcgcc
gcgggcgagatgcgcggccggctgcggcagctcggcgcgggcggcgtccaggcccgcacg
ttccactccgcggccctccggcagctccagtacttctggccgaaagccgtcggcggcgac
ctgccgcggctcatcgaccgcaaggcccagctcgtcgccgacgccgccacccgctgccgg
atccggctggaccgcaccgagctgcgggacgtcacgtccgagatcgagtgggccaaggtc
acccagaccgtccccgccgactacccggcggccgtcgccaaggcccagcgcgacgccccc
cgcgaccctgcagagacctgccaggtctacgccatgtacgagcagctgaagcgggagcgc
gacgtcctcgacttcgaggacgtgctgctgctcacggtcggcgtcctccaggaccggcac
gacatcgccgagcaggtccgccgccagtaccagcacttcgtcgtggacgagtaccaggac
gtctccccgctccagcagcgcctgctcgacctgtggctcggcgaccgcgacagcctctgc
gtcgtcggcgacgccagccagacgatctactccttcaccggcgccacccccgactacctg
ctggacttccgcacccgccatccgcacgccacggtcgtcaagctggtccgcgactaccgc
tccaccccccaggtcgtccacctcgccaacggtctcctcgcccaggcgagcggccgcgcc
gccgaccaccggctggaactggtctcccagcgcggccccggacccgagcccgtctacacc
gagtacggcgacgaacccaccgaggcggagggcaccgcccgacgcatccgcgacctcgtc
gcctccggcgtcccggcgggcgagatcgccgtgctgtaccgggtgaacgcccagtccgag
atctacgagcaggccctcgccgacgcgggcgtcccctaccagctccgcggcgccgagcgg
ttcttcgagcgccaggaggtgcgggaggcgggcgccgccctgcgcagcgccgcccggttc
ggcgggaacgactcgctcctggacgacgtcgtcgacctgccgtcccaggtccgcgccgtg
ctctccaccaagggctggacgaccgagccccccgccggttccggcgccgtacgggaccgc
tgggagtcgctggccgcgctggtccgcctggccgaggacctcgcccgcgcccgcccgcag
gccaccctcgccgacctggtgaccgagctcgacgagcgggccgccgcccagcacgccccg
accgtccagggcgtcaccctcgcctccctccacgcggcgaagggcctcgaatgggacgcc
gtgttcctcgtcggcctcaccgagggcatgctgcccatcacctacgcccgcaccgacgag
caggtggaggaggagcgacggctgctctacgtcggcgtgacccgcgcccgcagccatctg
agcctgtcgtggtcgctctcccgctcgcccggtggccggccccaccgcgagccgtcccgc
ttcctgaaggggctgcgccccggcagcggggcccccgccccgcgcaccgtccgcgcggcc
ggcggcgccgagcgcggggcggcggggccggcccgcgcccggcgcgcccggggcccggtc
cgctgccgcgtgtgcgggacgacgctcacggtcgcgggcgagatgaagctgatgcgctgc
gaggactgcccgtcggagatggacgaggggctgtacgcgcggctcctcgactggcgtgcc
gcccgggcccgccggatcgggcagcccgactactgcgtcttcaccgagaagaccctcatc
gccatcgccgagaccgtcccgtccaccgacgccgaactggccgcgatccccggcgtcggc
atccgcaagctcaaccgcttcggagccgaagtgctggccatctgcgcaggtggggaaggg
gtggacgaggacggcgaagactga
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